Gene : Medtr8g015620 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF07303 - Occludin homology domain (Occludin_ELL) Description:  dentin sialophosphoprotein-like protein
Genomic Order:  730 Name:  ? Medtr8g015620
Secondary Identifier:  ? PAC:31070761
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g015620 0.5kb upstream 0.5kb upstream 9300   true chr8: 5140148-5149447 Medicago truncatula
Medtr8g015620 0.5kb upstream 0.5kb upstream 500   false chr8: 5148948-5149447 Medicago truncatula
Medtr8g015620 0.5kb downstream 0.5kb downstream 9300   true chr8: 5139648-5148947 Medicago truncatula
Medtr8g015620 0.5kb downstream 0.5kb downstream 500   false chr8: 5139648-5140147 Medicago truncatula
Medtr8g015620 1.0kb upstream 1.0kb upstream 9800   true chr8: 5140148-5149947 Medicago truncatula
Medtr8g015620 1.0kb upstream 1.0kb upstream 1000   false chr8: 5148948-5149947 Medicago truncatula
Medtr8g015620 1.0kb downstream 1.0kb downstream 9800   true chr8: 5139148-5148947 Medicago truncatula
Medtr8g015620 1.0kb downstream 1.0kb downstream 1000   false chr8: 5139148-5140147 Medicago truncatula
Medtr8g015620 2.0kb upstream 2.0kb upstream 10800   true chr8: 5140148-5150947 Medicago truncatula
Medtr8g015620 2.0kb upstream 2.0kb upstream 2000   false chr8: 5148948-5150947 Medicago truncatula
Medtr8g015620 2.0kb downstream 2.0kb downstream 10800   true chr8: 5138148-5148947 Medicago truncatula
Medtr8g015620 2.0kb downstream 2.0kb downstream 2000   false chr8: 5138148-5140147 Medicago truncatula
Medtr8g015620 5.0kb upstream 5.0kb upstream 13800   true chr8: 5140148-5153947 Medicago truncatula
Medtr8g015620 5.0kb upstream 5.0kb upstream 5000   false chr8: 5148948-5153947 Medicago truncatula
Medtr8g015620 5.0kb downstream 5.0kb downstream 13800   true chr8: 5135148-5148947 Medicago truncatula
Medtr8g015620 5.0kb downstream 5.0kb downstream 5000   false chr8: 5135148-5140147 Medicago truncatula
Medtr8g015620 10.0kb upstream 10.0kb upstream 18800   true chr8: 5140148-5158947 Medicago truncatula
Medtr8g015620 10.0kb upstream 10.0kb upstream 10000   false chr8: 5148948-5158947 Medicago truncatula
Medtr8g015620 10.0kb downstream 10.0kb downstream 18800   true chr8: 5130148-5148947 Medicago truncatula
Medtr8g015620 10.0kb downstream 10.0kb downstream 10000   false chr8: 5130148-5140147 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303801 5265 Fabidae View MSA
124069075 5270 Rosid View MSA
123739076 5271 Pentapetalae View MSA
122788954 5272 Eudicot View MSA
122042901 5273 Angiosperm View MSA
121344929 5274 Embryophyte View MSA
123380129 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.951       High
cufflinks 2.587        
cufflinks 2.877        
cufflinks 0.917       Low
cufflinks 2.699        
cufflinks 1.614        
cufflinks 2.224        
cufflinks 2.716        
cufflinks 1.505        

0 Strain