Gene : Medtr8g015610 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF07303 - Occludin homology domain (Occludin_ELL) Description:  occludin-like domain protein
Genomic Order:  729 Name:  ? Medtr8g015610
Secondary Identifier:  ? PAC:31071884
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g015610 0.5kb upstream 0.5kb upstream 8037   true chr8: 5130677-5138713 Medicago truncatula
Medtr8g015610 0.5kb upstream 0.5kb upstream 500   false chr8: 5138214-5138713 Medicago truncatula
Medtr8g015610 0.5kb downstream 0.5kb downstream 8037   true chr8: 5130177-5138213 Medicago truncatula
Medtr8g015610 0.5kb downstream 0.5kb downstream 500   false chr8: 5130177-5130676 Medicago truncatula
Medtr8g015610 1.0kb upstream 1.0kb upstream 8537   true chr8: 5130677-5139213 Medicago truncatula
Medtr8g015610 1.0kb upstream 1.0kb upstream 1000   false chr8: 5138214-5139213 Medicago truncatula
Medtr8g015610 1.0kb downstream 1.0kb downstream 8537   true chr8: 5129677-5138213 Medicago truncatula
Medtr8g015610 1.0kb downstream 1.0kb downstream 1000   false chr8: 5129677-5130676 Medicago truncatula
Medtr8g015610 2.0kb upstream 2.0kb upstream 9537   true chr8: 5130677-5140213 Medicago truncatula
Medtr8g015610 2.0kb upstream 2.0kb upstream 2000   false chr8: 5138214-5140213 Medicago truncatula
Medtr8g015610 2.0kb downstream 2.0kb downstream 9537   true chr8: 5128677-5138213 Medicago truncatula
Medtr8g015610 2.0kb downstream 2.0kb downstream 2000   false chr8: 5128677-5130676 Medicago truncatula
Medtr8g015610 5.0kb upstream 5.0kb upstream 12537   true chr8: 5130677-5143213 Medicago truncatula
Medtr8g015610 5.0kb upstream 5.0kb upstream 5000   false chr8: 5138214-5143213 Medicago truncatula
Medtr8g015610 5.0kb downstream 5.0kb downstream 12537   true chr8: 5125677-5138213 Medicago truncatula
Medtr8g015610 5.0kb downstream 5.0kb downstream 5000   false chr8: 5125677-5130676 Medicago truncatula
Medtr8g015610 10.0kb upstream 10.0kb upstream 17537   true chr8: 5130677-5148213 Medicago truncatula
Medtr8g015610 10.0kb upstream 10.0kb upstream 10000   false chr8: 5138214-5148213 Medicago truncatula
Medtr8g015610 10.0kb downstream 10.0kb downstream 17537   true chr8: 5120677-5138213 Medicago truncatula
Medtr8g015610 10.0kb downstream 10.0kb downstream 10000   false chr8: 5120677-5130676 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303801 5265 Fabidae View MSA
124069075 5270 Rosid View MSA
123739076 5271 Pentapetalae View MSA
122788954 5272 Eudicot View MSA
122042901 5273 Angiosperm View MSA
121344929 5274 Embryophyte View MSA
123380129 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.679        
cufflinks 0.795        
cufflinks 1.278       High
cufflinks 0.029     Low Low
cufflinks 0.971        
cufflinks 0.086     Low  
cufflinks 0.112        
cufflinks 0.895        
cufflinks 0.033     Low Low

0 Strain