Gene : Medtr8g015510 M. truncatula Mt4.0v1

Defline:  (1 of 10) PTHR11014:SF55 - IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Description:  IAA-amino acid hydrolase ILR1-like protein
Genomic Order:  720 Name:  ? Medtr8g015510
Secondary Identifier:  ? PAC:31071938

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g015510 0.5kb upstream 0.5kb upstream 6645   true chr8: 5067996-5074640 Medicago truncatula
Medtr8g015510 0.5kb upstream 0.5kb upstream 500   false chr8: 5074141-5074640 Medicago truncatula
Medtr8g015510 0.5kb downstream 0.5kb downstream 6645   true chr8: 5067496-5074140 Medicago truncatula
Medtr8g015510 0.5kb downstream 0.5kb downstream 500   false chr8: 5067496-5067995 Medicago truncatula
Medtr8g015510 1.0kb upstream 1.0kb upstream 7145   true chr8: 5067996-5075140 Medicago truncatula
Medtr8g015510 1.0kb upstream 1.0kb upstream 1000   false chr8: 5074141-5075140 Medicago truncatula
Medtr8g015510 1.0kb downstream 1.0kb downstream 7145   true chr8: 5066996-5074140 Medicago truncatula
Medtr8g015510 1.0kb downstream 1.0kb downstream 1000   false chr8: 5066996-5067995 Medicago truncatula
Medtr8g015510 2.0kb upstream 2.0kb upstream 8145   true chr8: 5067996-5076140 Medicago truncatula
Medtr8g015510 2.0kb upstream 2.0kb upstream 2000   false chr8: 5074141-5076140 Medicago truncatula
Medtr8g015510 2.0kb downstream 2.0kb downstream 8145   true chr8: 5065996-5074140 Medicago truncatula
Medtr8g015510 2.0kb downstream 2.0kb downstream 2000   false chr8: 5065996-5067995 Medicago truncatula
Medtr8g015510 5.0kb upstream 5.0kb upstream 11145   true chr8: 5067996-5079140 Medicago truncatula
Medtr8g015510 5.0kb upstream 5.0kb upstream 5000   false chr8: 5074141-5079140 Medicago truncatula
Medtr8g015510 5.0kb downstream 5.0kb downstream 11145   true chr8: 5062996-5074140 Medicago truncatula
Medtr8g015510 5.0kb downstream 5.0kb downstream 5000   false chr8: 5062996-5067995 Medicago truncatula
Medtr8g015510 10.0kb upstream 10.0kb upstream 16145   true chr8: 5067996-5084140 Medicago truncatula
Medtr8g015510 10.0kb upstream 10.0kb upstream 10000   false chr8: 5074141-5084140 Medicago truncatula
Medtr8g015510 10.0kb downstream 10.0kb downstream 16145   true chr8: 5057996-5074140 Medicago truncatula
Medtr8g015510 10.0kb downstream 10.0kb downstream 10000   false chr8: 5057996-5067995 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296998 5265 Fabidae View MSA
124073280 5270 Rosid View MSA
123745174 5271 Pentapetalae View MSA
122790280 5272 Eudicot View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.486        
cufflinks 2.249        
cufflinks 3.822       High
cufflinks 0.716        
cufflinks 4.222       High
cufflinks 0.473       Low
cufflinks 1.139        
cufflinks 2.945        
cufflinks 0.826        

0 Strain