Gene : Medtr8g016310 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11649:SF62 - PROTEIN SEY1 HOMOLOG Description:  ROOT HAIR defective 3 GTP-binding family protein
Genomic Order:  782 Name:  ? Medtr8g016310
Secondary Identifier:  ? PAC:31073694
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g016310 0.5kb upstream 0.5kb upstream 8969   true chr8: 5481718-5490686 Medicago truncatula
Medtr8g016310 0.5kb upstream 0.5kb upstream 500   false chr8: 5481718-5482217 Medicago truncatula
Medtr8g016310 0.5kb downstream 0.5kb downstream 8969   true chr8: 5482218-5491186 Medicago truncatula
Medtr8g016310 0.5kb downstream 0.5kb downstream 500   false chr8: 5490687-5491186 Medicago truncatula
Medtr8g016310 1.0kb upstream 1.0kb upstream 9469   true chr8: 5481218-5490686 Medicago truncatula
Medtr8g016310 1.0kb upstream 1.0kb upstream 1000   false chr8: 5481218-5482217 Medicago truncatula
Medtr8g016310 1.0kb downstream 1.0kb downstream 9469   true chr8: 5482218-5491686 Medicago truncatula
Medtr8g016310 1.0kb downstream 1.0kb downstream 1000   false chr8: 5490687-5491686 Medicago truncatula
Medtr8g016310 2.0kb upstream 2.0kb upstream 10469   true chr8: 5480218-5490686 Medicago truncatula
Medtr8g016310 2.0kb upstream 2.0kb upstream 2000   false chr8: 5480218-5482217 Medicago truncatula
Medtr8g016310 2.0kb downstream 2.0kb downstream 10469   true chr8: 5482218-5492686 Medicago truncatula
Medtr8g016310 2.0kb downstream 2.0kb downstream 2000   false chr8: 5490687-5492686 Medicago truncatula
Medtr8g016310 5.0kb upstream 5.0kb upstream 13469   true chr8: 5477218-5490686 Medicago truncatula
Medtr8g016310 5.0kb upstream 5.0kb upstream 5000   false chr8: 5477218-5482217 Medicago truncatula
Medtr8g016310 5.0kb downstream 5.0kb downstream 13469   true chr8: 5482218-5495686 Medicago truncatula
Medtr8g016310 5.0kb downstream 5.0kb downstream 5000   false chr8: 5490687-5495686 Medicago truncatula
Medtr8g016310 10.0kb upstream 10.0kb upstream 18469   true chr8: 5472218-5490686 Medicago truncatula
Medtr8g016310 10.0kb upstream 10.0kb upstream 10000   false chr8: 5472218-5482217 Medicago truncatula
Medtr8g016310 10.0kb downstream 10.0kb downstream 18469   true chr8: 5482218-5500686 Medicago truncatula
Medtr8g016310 10.0kb downstream 10.0kb downstream 10000   false chr8: 5490687-5500686 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308651 5265 Fabidae View MSA
124066568 5270 Rosid View MSA
123749417 5271 Pentapetalae View MSA
122789407 5272 Eudicot View MSA
122048345 5273 Angiosperm View MSA
121345089 5274 Embryophyte View MSA
123427050 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.653       High
cufflinks 4.185        
cufflinks 3.034        
cufflinks 2.353        
cufflinks 4.838        
cufflinks 1.35       Low
cufflinks 4.996        
cufflinks 3.154        
cufflinks 5.773        

0 Strain