Gene : Medtr8g016180 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24286:SF30 - 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE Description:  cytochrome P450 family 90 protein
Genomic Order:  774 Name:  ? Medtr8g016180
Secondary Identifier:  ? PAC:31076284
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g016180 0.5kb upstream 0.5kb upstream 4389   true chr8: 5411276-5415664 Medicago truncatula
Medtr8g016180 0.5kb upstream 0.5kb upstream 500   false chr8: 5415165-5415664 Medicago truncatula
Medtr8g016180 0.5kb downstream 0.5kb downstream 4389   true chr8: 5410776-5415164 Medicago truncatula
Medtr8g016180 0.5kb downstream 0.5kb downstream 500   false chr8: 5410776-5411275 Medicago truncatula
Medtr8g016180 1.0kb upstream 1.0kb upstream 4889   true chr8: 5411276-5416164 Medicago truncatula
Medtr8g016180 1.0kb upstream 1.0kb upstream 1000   false chr8: 5415165-5416164 Medicago truncatula
Medtr8g016180 1.0kb downstream 1.0kb downstream 4889   true chr8: 5410276-5415164 Medicago truncatula
Medtr8g016180 1.0kb downstream 1.0kb downstream 1000   false chr8: 5410276-5411275 Medicago truncatula
Medtr8g016180 2.0kb upstream 2.0kb upstream 5889   true chr8: 5411276-5417164 Medicago truncatula
Medtr8g016180 2.0kb upstream 2.0kb upstream 2000   false chr8: 5415165-5417164 Medicago truncatula
Medtr8g016180 2.0kb downstream 2.0kb downstream 5889   true chr8: 5409276-5415164 Medicago truncatula
Medtr8g016180 2.0kb downstream 2.0kb downstream 2000   false chr8: 5409276-5411275 Medicago truncatula
Medtr8g016180 5.0kb upstream 5.0kb upstream 8889   true chr8: 5411276-5420164 Medicago truncatula
Medtr8g016180 5.0kb upstream 5.0kb upstream 5000   false chr8: 5415165-5420164 Medicago truncatula
Medtr8g016180 5.0kb downstream 5.0kb downstream 8889   true chr8: 5406276-5415164 Medicago truncatula
Medtr8g016180 5.0kb downstream 5.0kb downstream 5000   false chr8: 5406276-5411275 Medicago truncatula
Medtr8g016180 10.0kb upstream 10.0kb upstream 13889   true chr8: 5411276-5425164 Medicago truncatula
Medtr8g016180 10.0kb upstream 10.0kb upstream 10000   false chr8: 5415165-5425164 Medicago truncatula
Medtr8g016180 10.0kb downstream 10.0kb downstream 13889   true chr8: 5401276-5415164 Medicago truncatula
Medtr8g016180 10.0kb downstream 10.0kb downstream 10000   false chr8: 5401276-5411275 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305510 5265 Fabidae View MSA
124064486 5270 Rosid View MSA
123737325 5271 Pentapetalae View MSA
122792447 5272 Eudicot View MSA
122043858 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121351760 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.677       High
cufflinks 0.042     Low  
cufflinks 0.108        
cufflinks 0.105        
cufflinks 0.088        
cufflinks 0.033     Low  
cufflinks 0.055     Low  
cufflinks 0.068        
cufflinks 0.035     Low  

0 Strain