Gene : Medtr8g015910 M. truncatula Mt4.0v1
Defline:  (1 of 10) 3.1.3.75 - Phosphoethanolamine/phosphocholine phosphatase / PHOSPHO1 Description:  2,3-diketo-5-methylthio-1-phosphopentane phosphatase
Genomic Order:  752 Name:  ? Medtr8g015910
Secondary Identifier:  ? PAC:31070013
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3385 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g015910 0.5kb upstream 0.5kb upstream 3386   true chr8: 5248879-5252264 Medicago truncatula
Medtr8g015910 0.5kb upstream 0.5kb upstream 500   false chr8: 5248879-5249378 Medicago truncatula
Medtr8g015910 0.5kb downstream 0.5kb downstream 3386   true chr8: 5249379-5252764 Medicago truncatula
Medtr8g015910 0.5kb downstream 0.5kb downstream 500   false chr8: 5252265-5252764 Medicago truncatula
Medtr8g015910 1.0kb upstream 1.0kb upstream 3886   true chr8: 5248379-5252264 Medicago truncatula
Medtr8g015910 1.0kb upstream 1.0kb upstream 1000   false chr8: 5248379-5249378 Medicago truncatula
Medtr8g015910 1.0kb downstream 1.0kb downstream 3886   true chr8: 5249379-5253264 Medicago truncatula
Medtr8g015910 1.0kb downstream 1.0kb downstream 1000   false chr8: 5252265-5253264 Medicago truncatula
Medtr8g015910 2.0kb upstream 2.0kb upstream 4886   true chr8: 5247379-5252264 Medicago truncatula
Medtr8g015910 2.0kb upstream 2.0kb upstream 2000   false chr8: 5247379-5249378 Medicago truncatula
Medtr8g015910 2.0kb downstream 2.0kb downstream 4886   true chr8: 5249379-5254264 Medicago truncatula
Medtr8g015910 2.0kb downstream 2.0kb downstream 2000   false chr8: 5252265-5254264 Medicago truncatula
Medtr8g015910 5.0kb upstream 5.0kb upstream 7886   true chr8: 5244379-5252264 Medicago truncatula
Medtr8g015910 5.0kb upstream 5.0kb upstream 5000   false chr8: 5244379-5249378 Medicago truncatula
Medtr8g015910 5.0kb downstream 5.0kb downstream 7886   true chr8: 5249379-5257264 Medicago truncatula
Medtr8g015910 5.0kb downstream 5.0kb downstream 5000   false chr8: 5252265-5257264 Medicago truncatula
Medtr8g015910 10.0kb upstream 10.0kb upstream 12886   true chr8: 5239379-5252264 Medicago truncatula
Medtr8g015910 10.0kb upstream 10.0kb upstream 10000   false chr8: 5239379-5249378 Medicago truncatula
Medtr8g015910 10.0kb downstream 10.0kb downstream 12886   true chr8: 5249379-5262264 Medicago truncatula
Medtr8g015910 10.0kb downstream 10.0kb downstream 10000   false chr8: 5252265-5262264 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041363 5273 Angiosperm View MSA
122299252 5265 Fabidae View MSA
124071983 5270 Rosid View MSA
123744582 5271 Pentapetalae View MSA
122796230 5272 Eudicot View MSA
121350912 5274 Embryophyte View MSA
123426221 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.562        
cufflinks 0.478        
cufflinks 0.265       Low
cufflinks 2.266        
cufflinks 0.797        
cufflinks 9.532       High
cufflinks 4.118        
cufflinks 0.269       Low
cufflinks 3.613        

0 Strain