Gene : Medtr8g015940 M. truncatula Mt4.0v1
Defline:  (1 of 10) 3.1.3.75 - Phosphoethanolamine/phosphocholine phosphatase / PHOSPHO1 Description:  2,3-diketo-5-methylthio-1-phosphopentane phosphatase
Genomic Order:  755 Name:  ? Medtr8g015940
Secondary Identifier:  ? PAC:31072394
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3385 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g015940 0.5kb upstream 0.5kb upstream 1699   true chr8: 5268330-5270028 Medicago truncatula
Medtr8g015940 0.5kb upstream 0.5kb upstream 500   false chr8: 5268330-5268829 Medicago truncatula
Medtr8g015940 0.5kb downstream 0.5kb downstream 1699   true chr8: 5268830-5270528 Medicago truncatula
Medtr8g015940 0.5kb downstream 0.5kb downstream 500   false chr8: 5270029-5270528 Medicago truncatula
Medtr8g015940 1.0kb upstream 1.0kb upstream 2199   true chr8: 5267830-5270028 Medicago truncatula
Medtr8g015940 1.0kb upstream 1.0kb upstream 1000   false chr8: 5267830-5268829 Medicago truncatula
Medtr8g015940 1.0kb downstream 1.0kb downstream 2199   true chr8: 5268830-5271028 Medicago truncatula
Medtr8g015940 1.0kb downstream 1.0kb downstream 1000   false chr8: 5270029-5271028 Medicago truncatula
Medtr8g015940 2.0kb upstream 2.0kb upstream 3199   true chr8: 5266830-5270028 Medicago truncatula
Medtr8g015940 2.0kb upstream 2.0kb upstream 2000   false chr8: 5266830-5268829 Medicago truncatula
Medtr8g015940 2.0kb downstream 2.0kb downstream 3199   true chr8: 5268830-5272028 Medicago truncatula
Medtr8g015940 2.0kb downstream 2.0kb downstream 2000   false chr8: 5270029-5272028 Medicago truncatula
Medtr8g015940 5.0kb upstream 5.0kb upstream 6199   true chr8: 5263830-5270028 Medicago truncatula
Medtr8g015940 5.0kb upstream 5.0kb upstream 5000   false chr8: 5263830-5268829 Medicago truncatula
Medtr8g015940 5.0kb downstream 5.0kb downstream 6199   true chr8: 5268830-5275028 Medicago truncatula
Medtr8g015940 5.0kb downstream 5.0kb downstream 5000   false chr8: 5270029-5275028 Medicago truncatula
Medtr8g015940 10.0kb upstream 10.0kb upstream 11199   true chr8: 5258830-5270028 Medicago truncatula
Medtr8g015940 10.0kb upstream 10.0kb upstream 10000   false chr8: 5258830-5268829 Medicago truncatula
Medtr8g015940 10.0kb downstream 10.0kb downstream 11199   true chr8: 5268830-5280028 Medicago truncatula
Medtr8g015940 10.0kb downstream 10.0kb downstream 10000   false chr8: 5270029-5280028 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041363 5273 Angiosperm View MSA
122289773 5265 Fabidae View MSA
124051975 5270 Rosid View MSA
123744582 5271 Pentapetalae View MSA
122796230 5272 Eudicot View MSA
121350912 5274 Embryophyte View MSA
123426221 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.651     High High
cufflinks 1.144        
cufflinks 0.771        
cufflinks 0.513        
cufflinks 0.759        
cufflinks 1.12        
cufflinks 4.376        
cufflinks 0.709        
cufflinks 3.344        

0 Strain