Gene : Medtr8g017180 M. truncatula Mt4.0v1
Description:  mediator of RNA polymerase II transcription subunit-like protein, putative Genomic Order:  825
Name:  ? Medtr8g017180 Secondary Identifier:  ? PAC:31076465
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g017180 0.5kb upstream 0.5kb upstream 4897   true chr8: 5772992-5777888 Medicago truncatula
Medtr8g017180 0.5kb upstream 0.5kb upstream 500   false chr8: 5777389-5777888 Medicago truncatula
Medtr8g017180 0.5kb downstream 0.5kb downstream 4897   true chr8: 5772492-5777388 Medicago truncatula
Medtr8g017180 0.5kb downstream 0.5kb downstream 500   false chr8: 5772492-5772991 Medicago truncatula
Medtr8g017180 1.0kb upstream 1.0kb upstream 5397   true chr8: 5772992-5778388 Medicago truncatula
Medtr8g017180 1.0kb upstream 1.0kb upstream 1000   false chr8: 5777389-5778388 Medicago truncatula
Medtr8g017180 1.0kb downstream 1.0kb downstream 5397   true chr8: 5771992-5777388 Medicago truncatula
Medtr8g017180 1.0kb downstream 1.0kb downstream 1000   false chr8: 5771992-5772991 Medicago truncatula
Medtr8g017180 2.0kb upstream 2.0kb upstream 6397   true chr8: 5772992-5779388 Medicago truncatula
Medtr8g017180 2.0kb upstream 2.0kb upstream 2000   false chr8: 5777389-5779388 Medicago truncatula
Medtr8g017180 2.0kb downstream 2.0kb downstream 6397   true chr8: 5770992-5777388 Medicago truncatula
Medtr8g017180 2.0kb downstream 2.0kb downstream 2000   false chr8: 5770992-5772991 Medicago truncatula
Medtr8g017180 5.0kb upstream 5.0kb upstream 9397   true chr8: 5772992-5782388 Medicago truncatula
Medtr8g017180 5.0kb upstream 5.0kb upstream 5000   false chr8: 5777389-5782388 Medicago truncatula
Medtr8g017180 5.0kb downstream 5.0kb downstream 9397   true chr8: 5767992-5777388 Medicago truncatula
Medtr8g017180 5.0kb downstream 5.0kb downstream 5000   false chr8: 5767992-5772991 Medicago truncatula
Medtr8g017180 10.0kb upstream 10.0kb upstream 14397   true chr8: 5772992-5787388 Medicago truncatula
Medtr8g017180 10.0kb upstream 10.0kb upstream 10000   false chr8: 5777389-5787388 Medicago truncatula
Medtr8g017180 10.0kb downstream 10.0kb downstream 14397   true chr8: 5762992-5777388 Medicago truncatula
Medtr8g017180 10.0kb downstream 10.0kb downstream 10000   false chr8: 5762992-5772991 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313146 5265 Fabidae View MSA
124073932 5270 Rosid View MSA
123737635 5271 Pentapetalae View MSA
122795020 5272 Eudicot View MSA
122049257 5273 Angiosperm View MSA
121349503 5274 Embryophyte View MSA
123381335 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.939        
cufflinks 7.148        
cufflinks 7.794       High
cufflinks 4.717       Low
cufflinks 7.277        
cufflinks 5.479        
cufflinks 7.759        
cufflinks 7.027        
cufflinks 4.492       Low

0 Strain