Gene : Medtr8g017080 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11353:SF85 - CHAPERONIN CPN60-LIKE 2, MITOCHONDRIAL Description:  TCP-1/cpn60 chaperonin family protein
Genomic Order:  820 Name:  ? Medtr8g017080
Secondary Identifier:  ? PAC:31073816
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g017080 0.5kb upstream 0.5kb upstream 7555   true chr8: 5738364-5745918 Medicago truncatula
Medtr8g017080 0.5kb upstream 0.5kb upstream 500   false chr8: 5738364-5738863 Medicago truncatula
Medtr8g017080 0.5kb downstream 0.5kb downstream 7555   true chr8: 5738864-5746418 Medicago truncatula
Medtr8g017080 0.5kb downstream 0.5kb downstream 500   false chr8: 5745919-5746418 Medicago truncatula
Medtr8g017080 1.0kb upstream 1.0kb upstream 8055   true chr8: 5737864-5745918 Medicago truncatula
Medtr8g017080 1.0kb upstream 1.0kb upstream 1000   false chr8: 5737864-5738863 Medicago truncatula
Medtr8g017080 1.0kb downstream 1.0kb downstream 8055   true chr8: 5738864-5746918 Medicago truncatula
Medtr8g017080 1.0kb downstream 1.0kb downstream 1000   false chr8: 5745919-5746918 Medicago truncatula
Medtr8g017080 2.0kb upstream 2.0kb upstream 9055   true chr8: 5736864-5745918 Medicago truncatula
Medtr8g017080 2.0kb upstream 2.0kb upstream 2000   false chr8: 5736864-5738863 Medicago truncatula
Medtr8g017080 2.0kb downstream 2.0kb downstream 9055   true chr8: 5738864-5747918 Medicago truncatula
Medtr8g017080 2.0kb downstream 2.0kb downstream 2000   false chr8: 5745919-5747918 Medicago truncatula
Medtr8g017080 5.0kb upstream 5.0kb upstream 12055   true chr8: 5733864-5745918 Medicago truncatula
Medtr8g017080 5.0kb upstream 5.0kb upstream 5000   false chr8: 5733864-5738863 Medicago truncatula
Medtr8g017080 5.0kb downstream 5.0kb downstream 12055   true chr8: 5738864-5750918 Medicago truncatula
Medtr8g017080 5.0kb downstream 5.0kb downstream 5000   false chr8: 5745919-5750918 Medicago truncatula
Medtr8g017080 10.0kb upstream 10.0kb upstream 17055   true chr8: 5728864-5745918 Medicago truncatula
Medtr8g017080 10.0kb upstream 10.0kb upstream 10000   false chr8: 5728864-5738863 Medicago truncatula
Medtr8g017080 10.0kb downstream 10.0kb downstream 17055   true chr8: 5738864-5755918 Medicago truncatula
Medtr8g017080 10.0kb downstream 10.0kb downstream 10000   false chr8: 5745919-5755918 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299970 5265 Fabidae View MSA
124067840 5270 Rosid View MSA
123743454 5271 Pentapetalae View MSA
122794275 5272 Eudicot View MSA
122050268 5273 Angiosperm View MSA
121346016 5274 Embryophyte View MSA
123428427 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.985        
cufflinks 2.603        
cufflinks 3.372        
cufflinks 0.89        
cufflinks 6.006        
cufflinks 0.088     Low Low
cufflinks 3.089        
cufflinks 3.558        
cufflinks 2.681        

0 Strain