Gene : Medtr8g016440 M. truncatula Mt4.0v1
Defline:  (1 of 76) PTHR11017//PTHR11017:SF162 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Description:  disease resistance protein (TIR-NBS-LRR class), putative
Genomic Order:  791 Name:  ? Medtr8g016440
Secondary Identifier:  ? PAC:31074878
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g016440 0.5kb upstream 0.5kb upstream 7820   true chr8: 5546830-5554649 Medicago truncatula
Medtr8g016440 0.5kb upstream 0.5kb upstream 500   false chr8: 5546830-5547329 Medicago truncatula
Medtr8g016440 0.5kb downstream 0.5kb downstream 7820   true chr8: 5547330-5555149 Medicago truncatula
Medtr8g016440 0.5kb downstream 0.5kb downstream 500   false chr8: 5554650-5555149 Medicago truncatula
Medtr8g016440 1.0kb upstream 1.0kb upstream 8320   true chr8: 5546330-5554649 Medicago truncatula
Medtr8g016440 1.0kb upstream 1.0kb upstream 1000   false chr8: 5546330-5547329 Medicago truncatula
Medtr8g016440 1.0kb downstream 1.0kb downstream 8320   true chr8: 5547330-5555649 Medicago truncatula
Medtr8g016440 1.0kb downstream 1.0kb downstream 1000   false chr8: 5554650-5555649 Medicago truncatula
Medtr8g016440 2.0kb upstream 2.0kb upstream 9320   true chr8: 5545330-5554649 Medicago truncatula
Medtr8g016440 2.0kb upstream 2.0kb upstream 2000   false chr8: 5545330-5547329 Medicago truncatula
Medtr8g016440 2.0kb downstream 2.0kb downstream 9320   true chr8: 5547330-5556649 Medicago truncatula
Medtr8g016440 2.0kb downstream 2.0kb downstream 2000   false chr8: 5554650-5556649 Medicago truncatula
Medtr8g016440 5.0kb upstream 5.0kb upstream 12320   true chr8: 5542330-5554649 Medicago truncatula
Medtr8g016440 5.0kb upstream 5.0kb upstream 5000   false chr8: 5542330-5547329 Medicago truncatula
Medtr8g016440 5.0kb downstream 5.0kb downstream 12320   true chr8: 5547330-5559649 Medicago truncatula
Medtr8g016440 5.0kb downstream 5.0kb downstream 5000   false chr8: 5554650-5559649 Medicago truncatula
Medtr8g016440 10.0kb upstream 10.0kb upstream 17320   true chr8: 5537330-5554649 Medicago truncatula
Medtr8g016440 10.0kb upstream 10.0kb upstream 10000   false chr8: 5537330-5547329 Medicago truncatula
Medtr8g016440 10.0kb downstream 10.0kb downstream 17320   true chr8: 5547330-5564649 Medicago truncatula
Medtr8g016440 10.0kb downstream 10.0kb downstream 10000   false chr8: 5554650-5564649 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657954 5273 Angiosperm View MSA
122298070 5265 Fabidae View MSA
124040644 5270 Rosid View MSA
123611932 5271 Pentapetalae View MSA
122646469 5272 Eudicot View MSA
120929975 5274 Embryophyte View MSA
122970521 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.908        
cufflinks 12.883     High  
cufflinks 16.053     High High
cufflinks 0.094       Low
cufflinks 14.698     High  
cufflinks 0.682        
cufflinks 0.614        
cufflinks 14.123     High  
cufflinks 0.822        

0 Strain