Gene : Medtr8g018620 M. truncatula Mt4.0v1
Defline:  (1 of 27) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Description:  seed linoleate 9S-lipoxygenase
Genomic Order:  900 Name:  ? Medtr8g018620
Secondary Identifier:  ? PAC:31071393
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g018620 0.5kb upstream 0.5kb upstream 4265   true chr8: 6389372-6393636 Medicago truncatula
Medtr8g018620 0.5kb upstream 0.5kb upstream 500   false chr8: 6393137-6393636 Medicago truncatula
Medtr8g018620 0.5kb downstream 0.5kb downstream 4265   true chr8: 6388872-6393136 Medicago truncatula
Medtr8g018620 0.5kb downstream 0.5kb downstream 500   false chr8: 6388872-6389371 Medicago truncatula
Medtr8g018620 1.0kb upstream 1.0kb upstream 4765   true chr8: 6389372-6394136 Medicago truncatula
Medtr8g018620 1.0kb upstream 1.0kb upstream 1000   false chr8: 6393137-6394136 Medicago truncatula
Medtr8g018620 1.0kb downstream 1.0kb downstream 4765   true chr8: 6388372-6393136 Medicago truncatula
Medtr8g018620 1.0kb downstream 1.0kb downstream 1000   false chr8: 6388372-6389371 Medicago truncatula
Medtr8g018620 2.0kb upstream 2.0kb upstream 5765   true chr8: 6389372-6395136 Medicago truncatula
Medtr8g018620 2.0kb upstream 2.0kb upstream 2000   false chr8: 6393137-6395136 Medicago truncatula
Medtr8g018620 2.0kb downstream 2.0kb downstream 5765   true chr8: 6387372-6393136 Medicago truncatula
Medtr8g018620 2.0kb downstream 2.0kb downstream 2000   false chr8: 6387372-6389371 Medicago truncatula
Medtr8g018620 5.0kb upstream 5.0kb upstream 8765   true chr8: 6389372-6398136 Medicago truncatula
Medtr8g018620 5.0kb upstream 5.0kb upstream 5000   false chr8: 6393137-6398136 Medicago truncatula
Medtr8g018620 5.0kb downstream 5.0kb downstream 8765   true chr8: 6384372-6393136 Medicago truncatula
Medtr8g018620 5.0kb downstream 5.0kb downstream 5000   false chr8: 6384372-6389371 Medicago truncatula
Medtr8g018620 10.0kb upstream 10.0kb upstream 13765   true chr8: 6389372-6403136 Medicago truncatula
Medtr8g018620 10.0kb upstream 10.0kb upstream 10000   false chr8: 6393137-6403136 Medicago truncatula
Medtr8g018620 10.0kb downstream 10.0kb downstream 13765   true chr8: 6379372-6393136 Medicago truncatula
Medtr8g018620 10.0kb downstream 10.0kb downstream 10000   false chr8: 6379372-6389371 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314818 5265 Fabidae View MSA
124052352 5270 Rosid View MSA
123750052 5271 Pentapetalae View MSA
122773445 5272 Eudicot View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.035     Low Low
cufflinks 11.276     High  
cufflinks 0.479        
cufflinks 0.645        
cufflinks 1.8        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.758        
cufflinks 29.382     High High
cufflinks 3.252        

0 Strain