Gene : Medtr8g018880 M. truncatula Mt4.0v1
Defline:  (1 of 96) 2.7.7.6 - DNA-directed RNA polymerase / RNA polymerase III Description:  DNA-directed RNA polymerase
Genomic Order:  920 Name:  ? Medtr8g018880
Secondary Identifier:  ? PAC:31071277
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g018880 0.5kb upstream 0.5kb upstream 1059   true chr8: 6532094-6533152 Medicago truncatula
Medtr8g018880 0.5kb upstream 0.5kb upstream 500   false chr8: 6532653-6533152 Medicago truncatula
Medtr8g018880 0.5kb downstream 0.5kb downstream 1059   true chr8: 6531594-6532652 Medicago truncatula
Medtr8g018880 0.5kb downstream 0.5kb downstream 500   false chr8: 6531594-6532093 Medicago truncatula
Medtr8g018880 1.0kb upstream 1.0kb upstream 1559   true chr8: 6532094-6533652 Medicago truncatula
Medtr8g018880 1.0kb upstream 1.0kb upstream 1000   false chr8: 6532653-6533652 Medicago truncatula
Medtr8g018880 1.0kb downstream 1.0kb downstream 1559   true chr8: 6531094-6532652 Medicago truncatula
Medtr8g018880 1.0kb downstream 1.0kb downstream 1000   false chr8: 6531094-6532093 Medicago truncatula
Medtr8g018880 2.0kb upstream 2.0kb upstream 2559   true chr8: 6532094-6534652 Medicago truncatula
Medtr8g018880 2.0kb upstream 2.0kb upstream 2000   false chr8: 6532653-6534652 Medicago truncatula
Medtr8g018880 2.0kb downstream 2.0kb downstream 2559   true chr8: 6530094-6532652 Medicago truncatula
Medtr8g018880 2.0kb downstream 2.0kb downstream 2000   false chr8: 6530094-6532093 Medicago truncatula
Medtr8g018880 5.0kb upstream 5.0kb upstream 5559   true chr8: 6532094-6537652 Medicago truncatula
Medtr8g018880 5.0kb upstream 5.0kb upstream 5000   false chr8: 6532653-6537652 Medicago truncatula
Medtr8g018880 5.0kb downstream 5.0kb downstream 5559   true chr8: 6527094-6532652 Medicago truncatula
Medtr8g018880 5.0kb downstream 5.0kb downstream 5000   false chr8: 6527094-6532093 Medicago truncatula
Medtr8g018880 10.0kb upstream 10.0kb upstream 10559   true chr8: 6532094-6542652 Medicago truncatula
Medtr8g018880 10.0kb upstream 10.0kb upstream 10000   false chr8: 6532653-6542652 Medicago truncatula
Medtr8g018880 10.0kb downstream 10.0kb downstream 10559   true chr8: 6522094-6532652 Medicago truncatula
Medtr8g018880 10.0kb downstream 10.0kb downstream 10000   false chr8: 6522094-6532093 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122268756 5265 Fabidae Singleton cluster - no MSA
124009599 5270 Rosid Singleton cluster - no MSA
123750020 5271 Pentapetalae View MSA
122797399 5272 Eudicot View MSA
122051262 5273 Angiosperm View MSA
121312381 5274 Embryophyte View MSA
123349558 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain