Gene : Medtr8g018770 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23151//PTHR23151:SF59 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Description:  long form dihydrolipoamide acetyltransferase
Genomic Order:  913 Name:  ? Medtr8g018770
Secondary Identifier:  ? PAC:31074973
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5173 Medicago truncatula pathologic  
Mtruncatula PWY-5464 Medicago truncatula pathologic  
Mtruncatula PYRUVDEHYD-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g018770 0.5kb upstream 0.5kb upstream 8121   true chr8: 6482280-6490400 Medicago truncatula
Medtr8g018770 0.5kb upstream 0.5kb upstream 500   false chr8: 6482280-6482779 Medicago truncatula
Medtr8g018770 0.5kb downstream 0.5kb downstream 8121   true chr8: 6482780-6490900 Medicago truncatula
Medtr8g018770 0.5kb downstream 0.5kb downstream 500   false chr8: 6490401-6490900 Medicago truncatula
Medtr8g018770 1.0kb upstream 1.0kb upstream 8621   true chr8: 6481780-6490400 Medicago truncatula
Medtr8g018770 1.0kb upstream 1.0kb upstream 1000   false chr8: 6481780-6482779 Medicago truncatula
Medtr8g018770 1.0kb downstream 1.0kb downstream 8621   true chr8: 6482780-6491400 Medicago truncatula
Medtr8g018770 1.0kb downstream 1.0kb downstream 1000   false chr8: 6490401-6491400 Medicago truncatula
Medtr8g018770 2.0kb upstream 2.0kb upstream 9621   true chr8: 6480780-6490400 Medicago truncatula
Medtr8g018770 2.0kb upstream 2.0kb upstream 2000   false chr8: 6480780-6482779 Medicago truncatula
Medtr8g018770 2.0kb downstream 2.0kb downstream 9621   true chr8: 6482780-6492400 Medicago truncatula
Medtr8g018770 2.0kb downstream 2.0kb downstream 2000   false chr8: 6490401-6492400 Medicago truncatula
Medtr8g018770 5.0kb upstream 5.0kb upstream 12621   true chr8: 6477780-6490400 Medicago truncatula
Medtr8g018770 5.0kb upstream 5.0kb upstream 5000   false chr8: 6477780-6482779 Medicago truncatula
Medtr8g018770 5.0kb downstream 5.0kb downstream 12621   true chr8: 6482780-6495400 Medicago truncatula
Medtr8g018770 5.0kb downstream 5.0kb downstream 5000   false chr8: 6490401-6495400 Medicago truncatula
Medtr8g018770 10.0kb upstream 10.0kb upstream 17621   true chr8: 6472780-6490400 Medicago truncatula
Medtr8g018770 10.0kb upstream 10.0kb upstream 10000   false chr8: 6472780-6482779 Medicago truncatula
Medtr8g018770 10.0kb downstream 10.0kb downstream 17621   true chr8: 6482780-6500400 Medicago truncatula
Medtr8g018770 10.0kb downstream 10.0kb downstream 10000   false chr8: 6490401-6500400 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302272 5265 Fabidae View MSA
124061053 5270 Rosid View MSA
123739083 5271 Pentapetalae View MSA
122788575 5272 Eudicot View MSA
122043289 5273 Angiosperm View MSA
121343868 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.845        
cufflinks 10.071     High  
cufflinks 7.916        
cufflinks 14.289     High  
cufflinks 9.801        
cufflinks 7.075       Low
cufflinks 12.294     High  
cufflinks 8.52        
cufflinks 20.125     High High

0 Strain