Gene : Medtr8g020310 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10827:SF52 - IP16409P Description:  calcium-binding EF hand-like protein
Genomic Order:  974 Name:  ? Medtr8g020310
Secondary Identifier:  ? PAC:31070642
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g020310 0.5kb upstream 0.5kb upstream 2772   true chr8: 7062902-7065673 Medicago truncatula
Medtr8g020310 0.5kb upstream 0.5kb upstream 500   false chr8: 7062902-7063401 Medicago truncatula
Medtr8g020310 0.5kb downstream 0.5kb downstream 2772   true chr8: 7063402-7066173 Medicago truncatula
Medtr8g020310 0.5kb downstream 0.5kb downstream 500   false chr8: 7065674-7066173 Medicago truncatula
Medtr8g020310 1.0kb upstream 1.0kb upstream 3272   true chr8: 7062402-7065673 Medicago truncatula
Medtr8g020310 1.0kb upstream 1.0kb upstream 1000   false chr8: 7062402-7063401 Medicago truncatula
Medtr8g020310 1.0kb downstream 1.0kb downstream 3272   true chr8: 7063402-7066673 Medicago truncatula
Medtr8g020310 1.0kb downstream 1.0kb downstream 1000   false chr8: 7065674-7066673 Medicago truncatula
Medtr8g020310 2.0kb upstream 2.0kb upstream 4272   true chr8: 7061402-7065673 Medicago truncatula
Medtr8g020310 2.0kb upstream 2.0kb upstream 2000   false chr8: 7061402-7063401 Medicago truncatula
Medtr8g020310 2.0kb downstream 2.0kb downstream 4272   true chr8: 7063402-7067673 Medicago truncatula
Medtr8g020310 2.0kb downstream 2.0kb downstream 2000   false chr8: 7065674-7067673 Medicago truncatula
Medtr8g020310 5.0kb upstream 5.0kb upstream 7272   true chr8: 7058402-7065673 Medicago truncatula
Medtr8g020310 5.0kb upstream 5.0kb upstream 5000   false chr8: 7058402-7063401 Medicago truncatula
Medtr8g020310 5.0kb downstream 5.0kb downstream 7272   true chr8: 7063402-7070673 Medicago truncatula
Medtr8g020310 5.0kb downstream 5.0kb downstream 5000   false chr8: 7065674-7070673 Medicago truncatula
Medtr8g020310 10.0kb upstream 10.0kb upstream 12272   true chr8: 7053402-7065673 Medicago truncatula
Medtr8g020310 10.0kb upstream 10.0kb upstream 10000   false chr8: 7053402-7063401 Medicago truncatula
Medtr8g020310 10.0kb downstream 10.0kb downstream 12272   true chr8: 7063402-7075673 Medicago truncatula
Medtr8g020310 10.0kb downstream 10.0kb downstream 10000   false chr8: 7065674-7075673 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121655649 5273 Angiosperm View MSA
122296012 5265 Fabidae View MSA
124035435 5270 Rosid View MSA
123608954 5271 Pentapetalae View MSA
122643605 5272 Eudicot View MSA
120927752 5274 Embryophyte View MSA
122968401 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.102        
cufflinks 3.992        
cufflinks 4.885       High
cufflinks 1.534       Low
cufflinks 3.139        
cufflinks 2.101       Low
cufflinks 3.348        
cufflinks 3.759        
cufflinks 3.103        

0 Strain