Gene : Medtr8g020880 M. truncatula Mt4.0v1
Defline:  (1 of 1) 2.7.6.5//3.2.1.37//3.2.1.55 - GTP diphosphokinase / Stringent factor // Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Description:  RelA/SpoT-like protein RSH2
Genomic Order:  1023 Name:  ? Medtr8g020880
Secondary Identifier:  ? PAC:31074561
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g020880 0.5kb upstream 0.5kb upstream 4736   true chr8: 7366192-7370927 Medicago truncatula
Medtr8g020880 0.5kb upstream 0.5kb upstream 500   false chr8: 7370428-7370927 Medicago truncatula
Medtr8g020880 0.5kb downstream 0.5kb downstream 4736   true chr8: 7365692-7370427 Medicago truncatula
Medtr8g020880 0.5kb downstream 0.5kb downstream 500   false chr8: 7365692-7366191 Medicago truncatula
Medtr8g020880 1.0kb upstream 1.0kb upstream 5236   true chr8: 7366192-7371427 Medicago truncatula
Medtr8g020880 1.0kb upstream 1.0kb upstream 1000   false chr8: 7370428-7371427 Medicago truncatula
Medtr8g020880 1.0kb downstream 1.0kb downstream 5236   true chr8: 7365192-7370427 Medicago truncatula
Medtr8g020880 1.0kb downstream 1.0kb downstream 1000   false chr8: 7365192-7366191 Medicago truncatula
Medtr8g020880 2.0kb upstream 2.0kb upstream 6236   true chr8: 7366192-7372427 Medicago truncatula
Medtr8g020880 2.0kb upstream 2.0kb upstream 2000   false chr8: 7370428-7372427 Medicago truncatula
Medtr8g020880 2.0kb downstream 2.0kb downstream 6236   true chr8: 7364192-7370427 Medicago truncatula
Medtr8g020880 2.0kb downstream 2.0kb downstream 2000   false chr8: 7364192-7366191 Medicago truncatula
Medtr8g020880 5.0kb upstream 5.0kb upstream 9236   true chr8: 7366192-7375427 Medicago truncatula
Medtr8g020880 5.0kb upstream 5.0kb upstream 5000   false chr8: 7370428-7375427 Medicago truncatula
Medtr8g020880 5.0kb downstream 5.0kb downstream 9236   true chr8: 7361192-7370427 Medicago truncatula
Medtr8g020880 5.0kb downstream 5.0kb downstream 5000   false chr8: 7361192-7366191 Medicago truncatula
Medtr8g020880 10.0kb upstream 10.0kb upstream 14236   true chr8: 7366192-7380427 Medicago truncatula
Medtr8g020880 10.0kb upstream 10.0kb upstream 10000   false chr8: 7370428-7380427 Medicago truncatula
Medtr8g020880 10.0kb downstream 10.0kb downstream 14236   true chr8: 7356192-7370427 Medicago truncatula
Medtr8g020880 10.0kb downstream 10.0kb downstream 10000   false chr8: 7356192-7366191 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306941 5265 Fabidae View MSA
124067255 5270 Rosid View MSA
123738848 5271 Pentapetalae View MSA
122789814 5272 Eudicot View MSA
122044078 5273 Angiosperm View MSA
121346145 5274 Embryophyte View MSA
123428478 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.51     High  
cufflinks 31.628     High  
cufflinks 39.211     High  
cufflinks 12.232     High Low
cufflinks 25.308     High  
cufflinks 8.789       Low
cufflinks 32.558     High  
cufflinks 36.638     High  
cufflinks 34.593     High  

0 Strain