Gene : Medtr8g020780 M. truncatula Mt4.0v1
Defline:  (1 of 5) PF04578 - Protein of unknown function, DUF594 (DUF594) Description:  DUF594 family protein
Genomic Order:  1015 Name:  ? Medtr8g020780
Secondary Identifier:  ? PAC:31069636
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g020780 0.5kb upstream 0.5kb upstream 3102   true chr8: 7327151-7330252 Medicago truncatula
Medtr8g020780 0.5kb upstream 0.5kb upstream 500   false chr8: 7329753-7330252 Medicago truncatula
Medtr8g020780 0.5kb downstream 0.5kb downstream 3102   true chr8: 7326651-7329752 Medicago truncatula
Medtr8g020780 0.5kb downstream 0.5kb downstream 500   false chr8: 7326651-7327150 Medicago truncatula
Medtr8g020780 1.0kb upstream 1.0kb upstream 3602   true chr8: 7327151-7330752 Medicago truncatula
Medtr8g020780 1.0kb upstream 1.0kb upstream 1000   false chr8: 7329753-7330752 Medicago truncatula
Medtr8g020780 1.0kb downstream 1.0kb downstream 3602   true chr8: 7326151-7329752 Medicago truncatula
Medtr8g020780 1.0kb downstream 1.0kb downstream 1000   false chr8: 7326151-7327150 Medicago truncatula
Medtr8g020780 2.0kb upstream 2.0kb upstream 4602   true chr8: 7327151-7331752 Medicago truncatula
Medtr8g020780 2.0kb upstream 2.0kb upstream 2000   false chr8: 7329753-7331752 Medicago truncatula
Medtr8g020780 2.0kb downstream 2.0kb downstream 4602   true chr8: 7325151-7329752 Medicago truncatula
Medtr8g020780 2.0kb downstream 2.0kb downstream 2000   false chr8: 7325151-7327150 Medicago truncatula
Medtr8g020780 5.0kb upstream 5.0kb upstream 7602   true chr8: 7327151-7334752 Medicago truncatula
Medtr8g020780 5.0kb upstream 5.0kb upstream 5000   false chr8: 7329753-7334752 Medicago truncatula
Medtr8g020780 5.0kb downstream 5.0kb downstream 7602   true chr8: 7322151-7329752 Medicago truncatula
Medtr8g020780 5.0kb downstream 5.0kb downstream 5000   false chr8: 7322151-7327150 Medicago truncatula
Medtr8g020780 10.0kb upstream 10.0kb upstream 12602   true chr8: 7327151-7339752 Medicago truncatula
Medtr8g020780 10.0kb upstream 10.0kb upstream 10000   false chr8: 7329753-7339752 Medicago truncatula
Medtr8g020780 10.0kb downstream 10.0kb downstream 12602   true chr8: 7317151-7329752 Medicago truncatula
Medtr8g020780 10.0kb downstream 10.0kb downstream 10000   false chr8: 7317151-7327150 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029142 5273 Angiosperm View MSA
122298835 5265 Fabidae View MSA
124074186 5270 Rosid View MSA
123752826 5271 Pentapetalae View MSA
122795885 5272 Eudicot View MSA
121350539 5274 Embryophyte View MSA
123381781 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.268        
cufflinks 0.02     Low  
cufflinks 0.006     Low Low
cufflinks 0.168        
cufflinks 0.017     Low  
cufflinks 0.047     Low  
cufflinks 0.935       High
cufflinks 0.011     Low  
cufflinks 0.949       High

0 Strain