Gene : Medtr8g009280 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10772:SF13 - CHLOROPLAST CHAPERONIN 10 Description:  GroES chaperonin
Genomic Order:  287 Name:  ? Medtr8g009280
Secondary Identifier:  ? PAC:31072789
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g009280 0.5kb upstream 0.5kb upstream 4485   true chr8: 2100657-2105141 Medicago truncatula
Medtr8g009280 0.5kb upstream 0.5kb upstream 500   false chr8: 2100657-2101156 Medicago truncatula
Medtr8g009280 0.5kb downstream 0.5kb downstream 4485   true chr8: 2101157-2105641 Medicago truncatula
Medtr8g009280 0.5kb downstream 0.5kb downstream 500   false chr8: 2105142-2105641 Medicago truncatula
Medtr8g009280 1.0kb upstream 1.0kb upstream 4985   true chr8: 2100157-2105141 Medicago truncatula
Medtr8g009280 1.0kb upstream 1.0kb upstream 1000   false chr8: 2100157-2101156 Medicago truncatula
Medtr8g009280 1.0kb downstream 1.0kb downstream 4985   true chr8: 2101157-2106141 Medicago truncatula
Medtr8g009280 1.0kb downstream 1.0kb downstream 1000   false chr8: 2105142-2106141 Medicago truncatula
Medtr8g009280 2.0kb upstream 2.0kb upstream 5985   true chr8: 2099157-2105141 Medicago truncatula
Medtr8g009280 2.0kb upstream 2.0kb upstream 2000   false chr8: 2099157-2101156 Medicago truncatula
Medtr8g009280 2.0kb downstream 2.0kb downstream 5985   true chr8: 2101157-2107141 Medicago truncatula
Medtr8g009280 2.0kb downstream 2.0kb downstream 2000   false chr8: 2105142-2107141 Medicago truncatula
Medtr8g009280 5.0kb upstream 5.0kb upstream 8985   true chr8: 2096157-2105141 Medicago truncatula
Medtr8g009280 5.0kb upstream 5.0kb upstream 5000   false chr8: 2096157-2101156 Medicago truncatula
Medtr8g009280 5.0kb downstream 5.0kb downstream 8985   true chr8: 2101157-2110141 Medicago truncatula
Medtr8g009280 5.0kb downstream 5.0kb downstream 5000   false chr8: 2105142-2110141 Medicago truncatula
Medtr8g009280 10.0kb upstream 10.0kb upstream 13985   true chr8: 2091157-2105141 Medicago truncatula
Medtr8g009280 10.0kb upstream 10.0kb upstream 10000   false chr8: 2091157-2101156 Medicago truncatula
Medtr8g009280 10.0kb downstream 10.0kb downstream 13985   true chr8: 2101157-2115141 Medicago truncatula
Medtr8g009280 10.0kb downstream 10.0kb downstream 10000   false chr8: 2105142-2115141 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301614 5265 Fabidae View MSA
124060577 5270 Rosid View MSA
123741920 5271 Pentapetalae View MSA
122785920 5272 Eudicot View MSA
122042502 5273 Angiosperm View MSA
121347169 5274 Embryophyte View MSA
123426072 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.815       Low
cufflinks 12.113     High  
cufflinks 15.656     High  
cufflinks 5.216        
cufflinks 20.738     High High
cufflinks 4.071        
cufflinks 2.549       Low
cufflinks 15.542     High  
cufflinks 4.179        

0 Strain