Gene : Medtr8g009970 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23205 - SPLICING FACTOR 3A SUBUNIT 2 Description:  splicing factor 3A subunit 2
Genomic Order:  344 Name:  ? Medtr8g009970
Secondary Identifier:  ? PAC:31073592
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g009970 0.5kb upstream 0.5kb upstream 4432   true chr8: 2491422-2495853 Medicago truncatula
Medtr8g009970 0.5kb upstream 0.5kb upstream 500   false chr8: 2491422-2491921 Medicago truncatula
Medtr8g009970 0.5kb downstream 0.5kb downstream 4432   true chr8: 2491922-2496353 Medicago truncatula
Medtr8g009970 0.5kb downstream 0.5kb downstream 500   false chr8: 2495854-2496353 Medicago truncatula
Medtr8g009970 1.0kb upstream 1.0kb upstream 4932   true chr8: 2490922-2495853 Medicago truncatula
Medtr8g009970 1.0kb upstream 1.0kb upstream 1000   false chr8: 2490922-2491921 Medicago truncatula
Medtr8g009970 1.0kb downstream 1.0kb downstream 4932   true chr8: 2491922-2496853 Medicago truncatula
Medtr8g009970 1.0kb downstream 1.0kb downstream 1000   false chr8: 2495854-2496853 Medicago truncatula
Medtr8g009970 2.0kb upstream 2.0kb upstream 5932   true chr8: 2489922-2495853 Medicago truncatula
Medtr8g009970 2.0kb upstream 2.0kb upstream 2000   false chr8: 2489922-2491921 Medicago truncatula
Medtr8g009970 2.0kb downstream 2.0kb downstream 5932   true chr8: 2491922-2497853 Medicago truncatula
Medtr8g009970 2.0kb downstream 2.0kb downstream 2000   false chr8: 2495854-2497853 Medicago truncatula
Medtr8g009970 5.0kb upstream 5.0kb upstream 8932   true chr8: 2486922-2495853 Medicago truncatula
Medtr8g009970 5.0kb upstream 5.0kb upstream 5000   false chr8: 2486922-2491921 Medicago truncatula
Medtr8g009970 5.0kb downstream 5.0kb downstream 8932   true chr8: 2491922-2500853 Medicago truncatula
Medtr8g009970 5.0kb downstream 5.0kb downstream 5000   false chr8: 2495854-2500853 Medicago truncatula
Medtr8g009970 10.0kb upstream 10.0kb upstream 13932   true chr8: 2481922-2495853 Medicago truncatula
Medtr8g009970 10.0kb upstream 10.0kb upstream 10000   false chr8: 2481922-2491921 Medicago truncatula
Medtr8g009970 10.0kb downstream 10.0kb downstream 13932   true chr8: 2491922-2505853 Medicago truncatula
Medtr8g009970 10.0kb downstream 10.0kb downstream 10000   false chr8: 2495854-2505853 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300303 5265 Fabidae View MSA
124064225 5270 Rosid View MSA
123745899 5271 Pentapetalae View MSA
122793816 5272 Eudicot View MSA
122043873 5273 Angiosperm View MSA
121344235 5274 Embryophyte View MSA
123425065 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.979       Low
cufflinks 3.52        
cufflinks 3.701        
cufflinks 5.443       High
cufflinks 4.156        
cufflinks 1.994       Low
cufflinks 2.245        
cufflinks 2.818        
cufflinks 5.047       High

0 Strain