Gene : Medtr8g009810 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31375:SF2 - POLYGALACTURONASE/PECTINASE Description:  pectin lyase superfamily protein
Genomic Order:  330 Name:  ? Medtr8g009810
Secondary Identifier:  ? PAC:31072447
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1081 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g009810 0.5kb upstream 0.5kb upstream 3522   true chr8: 2423452-2426973 Medicago truncatula
Medtr8g009810 0.5kb upstream 0.5kb upstream 500   false chr8: 2423452-2423951 Medicago truncatula
Medtr8g009810 0.5kb downstream 0.5kb downstream 3522   true chr8: 2423952-2427473 Medicago truncatula
Medtr8g009810 0.5kb downstream 0.5kb downstream 500   false chr8: 2426974-2427473 Medicago truncatula
Medtr8g009810 1.0kb upstream 1.0kb upstream 4022   true chr8: 2422952-2426973 Medicago truncatula
Medtr8g009810 1.0kb upstream 1.0kb upstream 1000   false chr8: 2422952-2423951 Medicago truncatula
Medtr8g009810 1.0kb downstream 1.0kb downstream 4022   true chr8: 2423952-2427973 Medicago truncatula
Medtr8g009810 1.0kb downstream 1.0kb downstream 1000   false chr8: 2426974-2427973 Medicago truncatula
Medtr8g009810 2.0kb upstream 2.0kb upstream 5022   true chr8: 2421952-2426973 Medicago truncatula
Medtr8g009810 2.0kb upstream 2.0kb upstream 2000   false chr8: 2421952-2423951 Medicago truncatula
Medtr8g009810 2.0kb downstream 2.0kb downstream 5022   true chr8: 2423952-2428973 Medicago truncatula
Medtr8g009810 2.0kb downstream 2.0kb downstream 2000   false chr8: 2426974-2428973 Medicago truncatula
Medtr8g009810 5.0kb upstream 5.0kb upstream 8022   true chr8: 2418952-2426973 Medicago truncatula
Medtr8g009810 5.0kb upstream 5.0kb upstream 5000   false chr8: 2418952-2423951 Medicago truncatula
Medtr8g009810 5.0kb downstream 5.0kb downstream 8022   true chr8: 2423952-2431973 Medicago truncatula
Medtr8g009810 5.0kb downstream 5.0kb downstream 5000   false chr8: 2426974-2431973 Medicago truncatula
Medtr8g009810 10.0kb upstream 10.0kb upstream 13022   true chr8: 2413952-2426973 Medicago truncatula
Medtr8g009810 10.0kb upstream 10.0kb upstream 10000   false chr8: 2413952-2423951 Medicago truncatula
Medtr8g009810 10.0kb downstream 10.0kb downstream 13022   true chr8: 2423952-2436973 Medicago truncatula
Medtr8g009810 10.0kb downstream 10.0kb downstream 10000   false chr8: 2426974-2436973 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314468 5265 Fabidae View MSA
124060937 5270 Rosid View MSA
123747300 5271 Pentapetalae View MSA
122794998 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain