Gene : Medtr8g009660 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10210:SF58 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 5, CHLOROPLASTIC Description:  ribose-phosphate pyrophosphokinase
Genomic Order:  318 Name:  ? Medtr8g009660
Secondary Identifier:  ? PAC:31075528
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-662 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g009660 0.5kb upstream 0.5kb upstream 7507   true chr8: 2336992-2344498 Medicago truncatula
Medtr8g009660 0.5kb upstream 0.5kb upstream 500   false chr8: 2343999-2344498 Medicago truncatula
Medtr8g009660 0.5kb downstream 0.5kb downstream 7507   true chr8: 2336492-2343998 Medicago truncatula
Medtr8g009660 0.5kb downstream 0.5kb downstream 500   false chr8: 2336492-2336991 Medicago truncatula
Medtr8g009660 1.0kb upstream 1.0kb upstream 8007   true chr8: 2336992-2344998 Medicago truncatula
Medtr8g009660 1.0kb upstream 1.0kb upstream 1000   false chr8: 2343999-2344998 Medicago truncatula
Medtr8g009660 1.0kb downstream 1.0kb downstream 8007   true chr8: 2335992-2343998 Medicago truncatula
Medtr8g009660 1.0kb downstream 1.0kb downstream 1000   false chr8: 2335992-2336991 Medicago truncatula
Medtr8g009660 2.0kb upstream 2.0kb upstream 9007   true chr8: 2336992-2345998 Medicago truncatula
Medtr8g009660 2.0kb upstream 2.0kb upstream 2000   false chr8: 2343999-2345998 Medicago truncatula
Medtr8g009660 2.0kb downstream 2.0kb downstream 9007   true chr8: 2334992-2343998 Medicago truncatula
Medtr8g009660 2.0kb downstream 2.0kb downstream 2000   false chr8: 2334992-2336991 Medicago truncatula
Medtr8g009660 5.0kb upstream 5.0kb upstream 12007   true chr8: 2336992-2348998 Medicago truncatula
Medtr8g009660 5.0kb upstream 5.0kb upstream 5000   false chr8: 2343999-2348998 Medicago truncatula
Medtr8g009660 5.0kb downstream 5.0kb downstream 12007   true chr8: 2331992-2343998 Medicago truncatula
Medtr8g009660 5.0kb downstream 5.0kb downstream 5000   false chr8: 2331992-2336991 Medicago truncatula
Medtr8g009660 10.0kb upstream 10.0kb upstream 17007   true chr8: 2336992-2353998 Medicago truncatula
Medtr8g009660 10.0kb upstream 10.0kb upstream 10000   false chr8: 2343999-2353998 Medicago truncatula
Medtr8g009660 10.0kb downstream 10.0kb downstream 17007   true chr8: 2326992-2343998 Medicago truncatula
Medtr8g009660 10.0kb downstream 10.0kb downstream 10000   false chr8: 2326992-2336991 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304636 5265 Fabidae View MSA
124060795 5270 Rosid View MSA
123749025 5271 Pentapetalae View MSA
122788028 5272 Eudicot View MSA
122042217 5273 Angiosperm View MSA
121347994 5274 Embryophyte View MSA
123427852 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.009        
cufflinks 2.08        
cufflinks 1.792        
cufflinks 1.262        
cufflinks 2.53       High
cufflinks 0.77       Low
cufflinks 0.887       Low
cufflinks 2.037        
cufflinks 1.151        

0 Strain