Gene : Medtr8g010140 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12866:SF5 - UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10 Description:  autophagocytosis-associated family protein
Genomic Order:  360 Name:  ? Medtr8g010140
Secondary Identifier:  ? PAC:31076043
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g010140 0.5kb upstream 0.5kb upstream 2788   true chr8: 2577226-2580013 Medicago truncatula
Medtr8g010140 0.5kb upstream 0.5kb upstream 500   false chr8: 2579514-2580013 Medicago truncatula
Medtr8g010140 0.5kb downstream 0.5kb downstream 2788   true chr8: 2576726-2579513 Medicago truncatula
Medtr8g010140 0.5kb downstream 0.5kb downstream 500   false chr8: 2576726-2577225 Medicago truncatula
Medtr8g010140 1.0kb upstream 1.0kb upstream 3288   true chr8: 2577226-2580513 Medicago truncatula
Medtr8g010140 1.0kb upstream 1.0kb upstream 1000   false chr8: 2579514-2580513 Medicago truncatula
Medtr8g010140 1.0kb downstream 1.0kb downstream 3288   true chr8: 2576226-2579513 Medicago truncatula
Medtr8g010140 1.0kb downstream 1.0kb downstream 1000   false chr8: 2576226-2577225 Medicago truncatula
Medtr8g010140 2.0kb upstream 2.0kb upstream 4288   true chr8: 2577226-2581513 Medicago truncatula
Medtr8g010140 2.0kb upstream 2.0kb upstream 2000   false chr8: 2579514-2581513 Medicago truncatula
Medtr8g010140 2.0kb downstream 2.0kb downstream 4288   true chr8: 2575226-2579513 Medicago truncatula
Medtr8g010140 2.0kb downstream 2.0kb downstream 2000   false chr8: 2575226-2577225 Medicago truncatula
Medtr8g010140 5.0kb upstream 5.0kb upstream 7288   true chr8: 2577226-2584513 Medicago truncatula
Medtr8g010140 5.0kb upstream 5.0kb upstream 5000   false chr8: 2579514-2584513 Medicago truncatula
Medtr8g010140 5.0kb downstream 5.0kb downstream 7288   true chr8: 2572226-2579513 Medicago truncatula
Medtr8g010140 5.0kb downstream 5.0kb downstream 5000   false chr8: 2572226-2577225 Medicago truncatula
Medtr8g010140 10.0kb upstream 10.0kb upstream 12288   true chr8: 2577226-2589513 Medicago truncatula
Medtr8g010140 10.0kb upstream 10.0kb upstream 10000   false chr8: 2579514-2589513 Medicago truncatula
Medtr8g010140 10.0kb downstream 10.0kb downstream 12288   true chr8: 2567226-2579513 Medicago truncatula
Medtr8g010140 10.0kb downstream 10.0kb downstream 10000   false chr8: 2567226-2577225 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299798 5265 Fabidae View MSA
124065951 5270 Rosid View MSA
123738819 5271 Pentapetalae View MSA
122789693 5272 Eudicot View MSA
122045044 5273 Angiosperm View MSA
121344822 5274 Embryophyte View MSA
123380107 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.697        
cufflinks 3.385        
cufflinks 3.536        
cufflinks 0.369       Low
cufflinks 7.358       High
cufflinks 0.53       Low
cufflinks 1.037        
cufflinks 3.442        
cufflinks 0.754        

0 Strain