Gene : Medtr8g013045 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12959 - GPI TRANSAMIDASE COMPONENT PIG-T-RELATED Description:  GPI transamidase component Gpi16 subunit-like protein
Genomic Order:  591 Name:  ? Medtr8g013045
Secondary Identifier:  ? PAC:31075781
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g013045 0.5kb upstream 0.5kb upstream 5946   true chr8: 4057531-4063476 Medicago truncatula
Medtr8g013045 0.5kb upstream 0.5kb upstream 500   false chr8: 4062977-4063476 Medicago truncatula
Medtr8g013045 0.5kb downstream 0.5kb downstream 5946   true chr8: 4057031-4062976 Medicago truncatula
Medtr8g013045 0.5kb downstream 0.5kb downstream 500   false chr8: 4057031-4057530 Medicago truncatula
Medtr8g013045 1.0kb upstream 1.0kb upstream 6446   true chr8: 4057531-4063976 Medicago truncatula
Medtr8g013045 1.0kb upstream 1.0kb upstream 1000   false chr8: 4062977-4063976 Medicago truncatula
Medtr8g013045 1.0kb downstream 1.0kb downstream 6446   true chr8: 4056531-4062976 Medicago truncatula
Medtr8g013045 1.0kb downstream 1.0kb downstream 1000   false chr8: 4056531-4057530 Medicago truncatula
Medtr8g013045 2.0kb upstream 2.0kb upstream 7446   true chr8: 4057531-4064976 Medicago truncatula
Medtr8g013045 2.0kb upstream 2.0kb upstream 2000   false chr8: 4062977-4064976 Medicago truncatula
Medtr8g013045 2.0kb downstream 2.0kb downstream 7446   true chr8: 4055531-4062976 Medicago truncatula
Medtr8g013045 2.0kb downstream 2.0kb downstream 2000   false chr8: 4055531-4057530 Medicago truncatula
Medtr8g013045 5.0kb upstream 5.0kb upstream 10446   true chr8: 4057531-4067976 Medicago truncatula
Medtr8g013045 5.0kb upstream 5.0kb upstream 5000   false chr8: 4062977-4067976 Medicago truncatula
Medtr8g013045 5.0kb downstream 5.0kb downstream 10446   true chr8: 4052531-4062976 Medicago truncatula
Medtr8g013045 5.0kb downstream 5.0kb downstream 5000   false chr8: 4052531-4057530 Medicago truncatula
Medtr8g013045 10.0kb upstream 10.0kb upstream 15446   true chr8: 4057531-4072976 Medicago truncatula
Medtr8g013045 10.0kb upstream 10.0kb upstream 10000   false chr8: 4062977-4072976 Medicago truncatula
Medtr8g013045 10.0kb downstream 10.0kb downstream 15446   true chr8: 4047531-4062976 Medicago truncatula
Medtr8g013045 10.0kb downstream 10.0kb downstream 10000   false chr8: 4047531-4057530 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302034 5265 Fabidae View MSA
124065019 5270 Rosid View MSA
123738275 5271 Pentapetalae View MSA
122788314 5272 Eudicot View MSA
122043448 5273 Angiosperm View MSA
121344802 5274 Embryophyte View MSA
123425263 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.412        
cufflinks 0.365        
cufflinks 0.359        
cufflinks 0.091       Low
cufflinks 0.467       High
cufflinks 0.169        
cufflinks 0.257        
cufflinks 0.304        
cufflinks 0.222        

0 Strain