Gene : Medtr8g012965 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR30372 - LIPID-A-DISACCHARIDE SYNTHASE Description:  lipid-A-disaccharide synthase
Genomic Order:  579 Name:  ? Medtr8g012965
Secondary Identifier:  ? PAC:31074009
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula NAGLIPASYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g012965 0.5kb upstream 0.5kb upstream 4578   true chr8: 3951009-3955586 Medicago truncatula
Medtr8g012965 0.5kb upstream 0.5kb upstream 500   false chr8: 3955087-3955586 Medicago truncatula
Medtr8g012965 0.5kb downstream 0.5kb downstream 4578   true chr8: 3950509-3955086 Medicago truncatula
Medtr8g012965 0.5kb downstream 0.5kb downstream 500   false chr8: 3950509-3951008 Medicago truncatula
Medtr8g012965 1.0kb upstream 1.0kb upstream 5078   true chr8: 3951009-3956086 Medicago truncatula
Medtr8g012965 1.0kb upstream 1.0kb upstream 1000   false chr8: 3955087-3956086 Medicago truncatula
Medtr8g012965 1.0kb downstream 1.0kb downstream 5078   true chr8: 3950009-3955086 Medicago truncatula
Medtr8g012965 1.0kb downstream 1.0kb downstream 1000   false chr8: 3950009-3951008 Medicago truncatula
Medtr8g012965 2.0kb upstream 2.0kb upstream 6078   true chr8: 3951009-3957086 Medicago truncatula
Medtr8g012965 2.0kb upstream 2.0kb upstream 2000   false chr8: 3955087-3957086 Medicago truncatula
Medtr8g012965 2.0kb downstream 2.0kb downstream 6078   true chr8: 3949009-3955086 Medicago truncatula
Medtr8g012965 2.0kb downstream 2.0kb downstream 2000   false chr8: 3949009-3951008 Medicago truncatula
Medtr8g012965 5.0kb upstream 5.0kb upstream 9078   true chr8: 3951009-3960086 Medicago truncatula
Medtr8g012965 5.0kb upstream 5.0kb upstream 5000   false chr8: 3955087-3960086 Medicago truncatula
Medtr8g012965 5.0kb downstream 5.0kb downstream 9078   true chr8: 3946009-3955086 Medicago truncatula
Medtr8g012965 5.0kb downstream 5.0kb downstream 5000   false chr8: 3946009-3951008 Medicago truncatula
Medtr8g012965 10.0kb upstream 10.0kb upstream 14078   true chr8: 3951009-3965086 Medicago truncatula
Medtr8g012965 10.0kb upstream 10.0kb upstream 10000   false chr8: 3955087-3965086 Medicago truncatula
Medtr8g012965 10.0kb downstream 10.0kb downstream 14078   true chr8: 3941009-3955086 Medicago truncatula
Medtr8g012965 10.0kb downstream 10.0kb downstream 10000   false chr8: 3941009-3951008 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303086 5265 Fabidae View MSA
124067392 5270 Rosid View MSA
123747166 5271 Pentapetalae View MSA
122791278 5272 Eudicot View MSA
122042549 5273 Angiosperm View MSA
121345953 5274 Embryophyte View MSA
123380297 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.015        
cufflinks 1.06        
cufflinks 1.425        
cufflinks 0.429        
cufflinks 1.515        
cufflinks 0.03     Low Low
cufflinks 0.838        
cufflinks 1.142        
cufflinks 0.594        

0 Strain