Gene : Medtr8g012960 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR33159:SF6 - RPM1-INTERACTING PROTEIN 4 Description:  RPM1 interacting protein 4 transcript protein
Genomic Order:  578 Name:  ? Medtr8g012960
Secondary Identifier:  ? PAC:31072533
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g012960 0.5kb upstream 0.5kb upstream 6144   true chr8: 3941471-3947614 Medicago truncatula
Medtr8g012960 0.5kb upstream 0.5kb upstream 500   false chr8: 3947115-3947614 Medicago truncatula
Medtr8g012960 0.5kb downstream 0.5kb downstream 6144   true chr8: 3940971-3947114 Medicago truncatula
Medtr8g012960 0.5kb downstream 0.5kb downstream 500   false chr8: 3940971-3941470 Medicago truncatula
Medtr8g012960 1.0kb upstream 1.0kb upstream 6644   true chr8: 3941471-3948114 Medicago truncatula
Medtr8g012960 1.0kb upstream 1.0kb upstream 1000   false chr8: 3947115-3948114 Medicago truncatula
Medtr8g012960 1.0kb downstream 1.0kb downstream 6644   true chr8: 3940471-3947114 Medicago truncatula
Medtr8g012960 1.0kb downstream 1.0kb downstream 1000   false chr8: 3940471-3941470 Medicago truncatula
Medtr8g012960 2.0kb upstream 2.0kb upstream 7644   true chr8: 3941471-3949114 Medicago truncatula
Medtr8g012960 2.0kb upstream 2.0kb upstream 2000   false chr8: 3947115-3949114 Medicago truncatula
Medtr8g012960 2.0kb downstream 2.0kb downstream 7644   true chr8: 3939471-3947114 Medicago truncatula
Medtr8g012960 2.0kb downstream 2.0kb downstream 2000   false chr8: 3939471-3941470 Medicago truncatula
Medtr8g012960 5.0kb upstream 5.0kb upstream 10644   true chr8: 3941471-3952114 Medicago truncatula
Medtr8g012960 5.0kb upstream 5.0kb upstream 5000   false chr8: 3947115-3952114 Medicago truncatula
Medtr8g012960 5.0kb downstream 5.0kb downstream 10644   true chr8: 3936471-3947114 Medicago truncatula
Medtr8g012960 5.0kb downstream 5.0kb downstream 5000   false chr8: 3936471-3941470 Medicago truncatula
Medtr8g012960 10.0kb upstream 10.0kb upstream 15644   true chr8: 3941471-3957114 Medicago truncatula
Medtr8g012960 10.0kb upstream 10.0kb upstream 10000   false chr8: 3947115-3957114 Medicago truncatula
Medtr8g012960 10.0kb downstream 10.0kb downstream 15644   true chr8: 3931471-3947114 Medicago truncatula
Medtr8g012960 10.0kb downstream 10.0kb downstream 10000   false chr8: 3931471-3941470 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311528 5265 Fabidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.832        
cufflinks 4.759        
cufflinks 2.666       Low
cufflinks 14.287     High High
cufflinks 3.796        
cufflinks 6.018        
cufflinks 18.597     High High
cufflinks 3.643        
cufflinks 13.125     High High

0 Strain