Gene : Medtr8g014020 M. truncatula Mt4.0v1
Defline:  (1 of 50) PF05553 - Cotton fibre expressed protein (DUF761) Description:  Avr9/Cf-9 rapidly elicited protein
Genomic Order:  629 Name:  ? Medtr8g014020
Secondary Identifier:  ? PAC:31074292
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g014020 0.5kb upstream 0.5kb upstream 1443   true chr8: 4352401-4353843 Medicago truncatula
Medtr8g014020 0.5kb upstream 0.5kb upstream 500   false chr8: 4352401-4352900 Medicago truncatula
Medtr8g014020 0.5kb downstream 0.5kb downstream 1443   true chr8: 4352901-4354343 Medicago truncatula
Medtr8g014020 0.5kb downstream 0.5kb downstream 500   false chr8: 4353844-4354343 Medicago truncatula
Medtr8g014020 1.0kb upstream 1.0kb upstream 1943   true chr8: 4351901-4353843 Medicago truncatula
Medtr8g014020 1.0kb upstream 1.0kb upstream 1000   false chr8: 4351901-4352900 Medicago truncatula
Medtr8g014020 1.0kb downstream 1.0kb downstream 1943   true chr8: 4352901-4354843 Medicago truncatula
Medtr8g014020 1.0kb downstream 1.0kb downstream 1000   false chr8: 4353844-4354843 Medicago truncatula
Medtr8g014020 2.0kb upstream 2.0kb upstream 2943   true chr8: 4350901-4353843 Medicago truncatula
Medtr8g014020 2.0kb upstream 2.0kb upstream 2000   false chr8: 4350901-4352900 Medicago truncatula
Medtr8g014020 2.0kb downstream 2.0kb downstream 2943   true chr8: 4352901-4355843 Medicago truncatula
Medtr8g014020 2.0kb downstream 2.0kb downstream 2000   false chr8: 4353844-4355843 Medicago truncatula
Medtr8g014020 5.0kb upstream 5.0kb upstream 5943   true chr8: 4347901-4353843 Medicago truncatula
Medtr8g014020 5.0kb upstream 5.0kb upstream 5000   false chr8: 4347901-4352900 Medicago truncatula
Medtr8g014020 5.0kb downstream 5.0kb downstream 5943   true chr8: 4352901-4358843 Medicago truncatula
Medtr8g014020 5.0kb downstream 5.0kb downstream 5000   false chr8: 4353844-4358843 Medicago truncatula
Medtr8g014020 10.0kb upstream 10.0kb upstream 10943   true chr8: 4342901-4353843 Medicago truncatula
Medtr8g014020 10.0kb upstream 10.0kb upstream 10000   false chr8: 4342901-4352900 Medicago truncatula
Medtr8g014020 10.0kb downstream 10.0kb downstream 10943   true chr8: 4352901-4363843 Medicago truncatula
Medtr8g014020 10.0kb downstream 10.0kb downstream 10000   false chr8: 4353844-4363843 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298873 5265 Fabidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.775        
cufflinks 0.453       Low
cufflinks 1.974        
cufflinks 2.753        
cufflinks 1.458        
cufflinks 2.996        
cufflinks 2.091        
cufflinks 0.901       Low
cufflinks 2.796        

0 Strain