Gene : Medtr8g074540 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12161:SF19 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Description:  regulator of Vps4 activity in the MVB pathway protein
Genomic Order:  3804 Name:  ? Medtr8g074540
Secondary Identifier:  ? PAC:31070850
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g074540 0.5kb upstream 0.5kb upstream 4372   true chr8: 31513686-31518057 Medicago truncatula
Medtr8g074540 0.5kb upstream 0.5kb upstream 500   false chr8: 31513686-31514185 Medicago truncatula
Medtr8g074540 0.5kb downstream 0.5kb downstream 4372   true chr8: 31514186-31518557 Medicago truncatula
Medtr8g074540 0.5kb downstream 0.5kb downstream 500   false chr8: 31518058-31518557 Medicago truncatula
Medtr8g074540 1.0kb upstream 1.0kb upstream 4872   true chr8: 31513186-31518057 Medicago truncatula
Medtr8g074540 1.0kb upstream 1.0kb upstream 1000   false chr8: 31513186-31514185 Medicago truncatula
Medtr8g074540 1.0kb downstream 1.0kb downstream 4872   true chr8: 31514186-31519057 Medicago truncatula
Medtr8g074540 1.0kb downstream 1.0kb downstream 1000   false chr8: 31518058-31519057 Medicago truncatula
Medtr8g074540 2.0kb upstream 2.0kb upstream 5872   true chr8: 31512186-31518057 Medicago truncatula
Medtr8g074540 2.0kb upstream 2.0kb upstream 2000   false chr8: 31512186-31514185 Medicago truncatula
Medtr8g074540 2.0kb downstream 2.0kb downstream 5872   true chr8: 31514186-31520057 Medicago truncatula
Medtr8g074540 2.0kb downstream 2.0kb downstream 2000   false chr8: 31518058-31520057 Medicago truncatula
Medtr8g074540 5.0kb upstream 5.0kb upstream 8872   true chr8: 31509186-31518057 Medicago truncatula
Medtr8g074540 5.0kb upstream 5.0kb upstream 5000   false chr8: 31509186-31514185 Medicago truncatula
Medtr8g074540 5.0kb downstream 5.0kb downstream 8872   true chr8: 31514186-31523057 Medicago truncatula
Medtr8g074540 5.0kb downstream 5.0kb downstream 5000   false chr8: 31518058-31523057 Medicago truncatula
Medtr8g074540 10.0kb upstream 10.0kb upstream 13872   true chr8: 31504186-31518057 Medicago truncatula
Medtr8g074540 10.0kb upstream 10.0kb upstream 10000   false chr8: 31504186-31514185 Medicago truncatula
Medtr8g074540 10.0kb downstream 10.0kb downstream 13872   true chr8: 31514186-31528057 Medicago truncatula
Medtr8g074540 10.0kb downstream 10.0kb downstream 10000   false chr8: 31518058-31528057 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026573 5273 Angiosperm View MSA
122302069 5265 Fabidae View MSA
124050952 5270 Rosid View MSA
123738388 5271 Pentapetalae View MSA
122790971 5272 Eudicot View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.497        
cufflinks 0.103        
cufflinks 0.125        
cufflinks 0.221        
cufflinks 0.082        
cufflinks 0.077     Low Low
cufflinks 0.431        
cufflinks 0.135        
cufflinks 1.087       High

0 Strain