Gene : Medtr8g073890 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.7.7.3 - Pantetheine-phosphate adenylyltransferase / PPAT Description:  phosphopantetheine adenylyltransferase
Genomic Order:  3768 Name:  ? Medtr8g073890
Secondary Identifier:  ? PAC:31074115
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula COA-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g073890 0.5kb upstream 0.5kb upstream 4372   true chr8: 31234595-31238966 Medicago truncatula
Medtr8g073890 0.5kb upstream 0.5kb upstream 500   false chr8: 31234595-31235094 Medicago truncatula
Medtr8g073890 0.5kb downstream 0.5kb downstream 4372   true chr8: 31235095-31239466 Medicago truncatula
Medtr8g073890 0.5kb downstream 0.5kb downstream 500   false chr8: 31238967-31239466 Medicago truncatula
Medtr8g073890 1.0kb upstream 1.0kb upstream 4872   true chr8: 31234095-31238966 Medicago truncatula
Medtr8g073890 1.0kb upstream 1.0kb upstream 1000   false chr8: 31234095-31235094 Medicago truncatula
Medtr8g073890 1.0kb downstream 1.0kb downstream 4872   true chr8: 31235095-31239966 Medicago truncatula
Medtr8g073890 1.0kb downstream 1.0kb downstream 1000   false chr8: 31238967-31239966 Medicago truncatula
Medtr8g073890 2.0kb upstream 2.0kb upstream 5872   true chr8: 31233095-31238966 Medicago truncatula
Medtr8g073890 2.0kb upstream 2.0kb upstream 2000   false chr8: 31233095-31235094 Medicago truncatula
Medtr8g073890 2.0kb downstream 2.0kb downstream 5872   true chr8: 31235095-31240966 Medicago truncatula
Medtr8g073890 2.0kb downstream 2.0kb downstream 2000   false chr8: 31238967-31240966 Medicago truncatula
Medtr8g073890 5.0kb upstream 5.0kb upstream 8872   true chr8: 31230095-31238966 Medicago truncatula
Medtr8g073890 5.0kb upstream 5.0kb upstream 5000   false chr8: 31230095-31235094 Medicago truncatula
Medtr8g073890 5.0kb downstream 5.0kb downstream 8872   true chr8: 31235095-31243966 Medicago truncatula
Medtr8g073890 5.0kb downstream 5.0kb downstream 5000   false chr8: 31238967-31243966 Medicago truncatula
Medtr8g073890 10.0kb upstream 10.0kb upstream 13872   true chr8: 31225095-31238966 Medicago truncatula
Medtr8g073890 10.0kb upstream 10.0kb upstream 10000   false chr8: 31225095-31235094 Medicago truncatula
Medtr8g073890 10.0kb downstream 10.0kb downstream 13872   true chr8: 31235095-31248966 Medicago truncatula
Medtr8g073890 10.0kb downstream 10.0kb downstream 10000   false chr8: 31238967-31248966 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316306 5265 Fabidae View MSA
124037076 5270 Rosid View MSA
123751907 5271 Pentapetalae View MSA
122795383 5272 Eudicot View MSA
122050871 5273 Angiosperm View MSA
121345308 5274 Embryophyte View MSA
123425957 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.82        
cufflinks 0.668        
cufflinks 0.672        
cufflinks 1.062        
cufflinks 0.69        
cufflinks 1.177       High
cufflinks 1.097        
cufflinks 0.646       Low
cufflinks 1.097        

0 Strain