Gene : Medtr8g075655 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF04195 - Putative gypsy type transposon (Transposase_28) Description:  hypothetical protein
Genomic Order:  3886 Name:  ? Medtr8g075655
Secondary Identifier:  ? PAC:31072627
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g075655 0.5kb upstream 0.5kb upstream 1088   true chr8: 31989264-31990351 Medicago truncatula
Medtr8g075655 0.5kb upstream 0.5kb upstream 500   false chr8: 31989852-31990351 Medicago truncatula
Medtr8g075655 0.5kb downstream 0.5kb downstream 1088   true chr8: 31988764-31989851 Medicago truncatula
Medtr8g075655 0.5kb downstream 0.5kb downstream 500   false chr8: 31988764-31989263 Medicago truncatula
Medtr8g075655 1.0kb upstream 1.0kb upstream 1588   true chr8: 31989264-31990851 Medicago truncatula
Medtr8g075655 1.0kb upstream 1.0kb upstream 1000   false chr8: 31989852-31990851 Medicago truncatula
Medtr8g075655 1.0kb downstream 1.0kb downstream 1588   true chr8: 31988264-31989851 Medicago truncatula
Medtr8g075655 1.0kb downstream 1.0kb downstream 1000   false chr8: 31988264-31989263 Medicago truncatula
Medtr8g075655 2.0kb upstream 2.0kb upstream 2588   true chr8: 31989264-31991851 Medicago truncatula
Medtr8g075655 2.0kb upstream 2.0kb upstream 2000   false chr8: 31989852-31991851 Medicago truncatula
Medtr8g075655 2.0kb downstream 2.0kb downstream 2588   true chr8: 31987264-31989851 Medicago truncatula
Medtr8g075655 2.0kb downstream 2.0kb downstream 2000   false chr8: 31987264-31989263 Medicago truncatula
Medtr8g075655 5.0kb upstream 5.0kb upstream 5588   true chr8: 31989264-31994851 Medicago truncatula
Medtr8g075655 5.0kb upstream 5.0kb upstream 5000   false chr8: 31989852-31994851 Medicago truncatula
Medtr8g075655 5.0kb downstream 5.0kb downstream 5588   true chr8: 31984264-31989851 Medicago truncatula
Medtr8g075655 5.0kb downstream 5.0kb downstream 5000   false chr8: 31984264-31989263 Medicago truncatula
Medtr8g075655 10.0kb upstream 10.0kb upstream 10588   true chr8: 31989264-31999851 Medicago truncatula
Medtr8g075655 10.0kb upstream 10.0kb upstream 10000   false chr8: 31989852-31999851 Medicago truncatula
Medtr8g075655 10.0kb downstream 10.0kb downstream 10588   true chr8: 31979264-31989851 Medicago truncatula
Medtr8g075655 10.0kb downstream 10.0kb downstream 10000   false chr8: 31979264-31989263 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632498 5273 Angiosperm View MSA
122271211 5265 Fabidae View MSA
124011856 5270 Rosid View MSA
123585754 5271 Pentapetalae View MSA
122620451 5272 Eudicot View MSA
120904602 5274 Embryophyte View MSA
122945251 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain