Gene : Medtr8g075430 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22807:SF16 - S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN Description:  NOL1/NOP2/sun family RNA methylase, putative
Genomic Order:  3871 Name:  ? Medtr8g075430
Secondary Identifier:  ? PAC:31071856
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6829 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g075430 0.5kb upstream 0.5kb upstream 4096   true chr8: 31899000-31903095 Medicago truncatula
Medtr8g075430 0.5kb upstream 0.5kb upstream 500   false chr8: 31899000-31899499 Medicago truncatula
Medtr8g075430 0.5kb downstream 0.5kb downstream 4096   true chr8: 31899500-31903595 Medicago truncatula
Medtr8g075430 0.5kb downstream 0.5kb downstream 500   false chr8: 31903096-31903595 Medicago truncatula
Medtr8g075430 1.0kb upstream 1.0kb upstream 4596   true chr8: 31898500-31903095 Medicago truncatula
Medtr8g075430 1.0kb upstream 1.0kb upstream 1000   false chr8: 31898500-31899499 Medicago truncatula
Medtr8g075430 1.0kb downstream 1.0kb downstream 4596   true chr8: 31899500-31904095 Medicago truncatula
Medtr8g075430 1.0kb downstream 1.0kb downstream 1000   false chr8: 31903096-31904095 Medicago truncatula
Medtr8g075430 2.0kb upstream 2.0kb upstream 5596   true chr8: 31897500-31903095 Medicago truncatula
Medtr8g075430 2.0kb upstream 2.0kb upstream 2000   false chr8: 31897500-31899499 Medicago truncatula
Medtr8g075430 2.0kb downstream 2.0kb downstream 5596   true chr8: 31899500-31905095 Medicago truncatula
Medtr8g075430 2.0kb downstream 2.0kb downstream 2000   false chr8: 31903096-31905095 Medicago truncatula
Medtr8g075430 5.0kb upstream 5.0kb upstream 8596   true chr8: 31894500-31903095 Medicago truncatula
Medtr8g075430 5.0kb upstream 5.0kb upstream 5000   false chr8: 31894500-31899499 Medicago truncatula
Medtr8g075430 5.0kb downstream 5.0kb downstream 8596   true chr8: 31899500-31908095 Medicago truncatula
Medtr8g075430 5.0kb downstream 5.0kb downstream 5000   false chr8: 31903096-31908095 Medicago truncatula
Medtr8g075430 10.0kb upstream 10.0kb upstream 13596   true chr8: 31889500-31903095 Medicago truncatula
Medtr8g075430 10.0kb upstream 10.0kb upstream 10000   false chr8: 31889500-31899499 Medicago truncatula
Medtr8g075430 10.0kb downstream 10.0kb downstream 13596   true chr8: 31899500-31913095 Medicago truncatula
Medtr8g075430 10.0kb downstream 10.0kb downstream 10000   false chr8: 31903096-31913095 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308126 5265 Fabidae View MSA
124050429 5270 Rosid View MSA
123737696 5271 Pentapetalae View MSA
122785944 5272 Eudicot View MSA
122044592 5273 Angiosperm View MSA
121346334 5274 Embryophyte View MSA
123425870 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.188        
cufflinks 1.148        
cufflinks 1.049        
cufflinks 0.519       Low
cufflinks 1.202        
cufflinks 0.425       Low
cufflinks 0.773        
cufflinks 0.887        
cufflinks 0.74        

0 Strain