Gene : Medtr8g077020 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10783:SF3 - VACUOLAR TRANSPORTER CHAPERONE 4 Description:  SPX domain protein
Genomic Order:  3976 Name:  ? Medtr8g077020
Secondary Identifier:  ? PAC:31071276
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g077020 0.5kb upstream 0.5kb upstream 3896   true chr8: 32695337-32699232 Medicago truncatula
Medtr8g077020 0.5kb upstream 0.5kb upstream 500   false chr8: 32695337-32695836 Medicago truncatula
Medtr8g077020 0.5kb downstream 0.5kb downstream 3896   true chr8: 32695837-32699732 Medicago truncatula
Medtr8g077020 0.5kb downstream 0.5kb downstream 500   false chr8: 32699233-32699732 Medicago truncatula
Medtr8g077020 1.0kb upstream 1.0kb upstream 4396   true chr8: 32694837-32699232 Medicago truncatula
Medtr8g077020 1.0kb upstream 1.0kb upstream 1000   false chr8: 32694837-32695836 Medicago truncatula
Medtr8g077020 1.0kb downstream 1.0kb downstream 4396   true chr8: 32695837-32700232 Medicago truncatula
Medtr8g077020 1.0kb downstream 1.0kb downstream 1000   false chr8: 32699233-32700232 Medicago truncatula
Medtr8g077020 2.0kb upstream 2.0kb upstream 5396   true chr8: 32693837-32699232 Medicago truncatula
Medtr8g077020 2.0kb upstream 2.0kb upstream 2000   false chr8: 32693837-32695836 Medicago truncatula
Medtr8g077020 2.0kb downstream 2.0kb downstream 5396   true chr8: 32695837-32701232 Medicago truncatula
Medtr8g077020 2.0kb downstream 2.0kb downstream 2000   false chr8: 32699233-32701232 Medicago truncatula
Medtr8g077020 5.0kb upstream 5.0kb upstream 8396   true chr8: 32690837-32699232 Medicago truncatula
Medtr8g077020 5.0kb upstream 5.0kb upstream 5000   false chr8: 32690837-32695836 Medicago truncatula
Medtr8g077020 5.0kb downstream 5.0kb downstream 8396   true chr8: 32695837-32704232 Medicago truncatula
Medtr8g077020 5.0kb downstream 5.0kb downstream 5000   false chr8: 32699233-32704232 Medicago truncatula
Medtr8g077020 10.0kb upstream 10.0kb upstream 13396   true chr8: 32685837-32699232 Medicago truncatula
Medtr8g077020 10.0kb upstream 10.0kb upstream 10000   false chr8: 32685837-32695836 Medicago truncatula
Medtr8g077020 10.0kb downstream 10.0kb downstream 13396   true chr8: 32695837-32709232 Medicago truncatula
Medtr8g077020 10.0kb downstream 10.0kb downstream 10000   false chr8: 32699233-32709232 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041268 5273 Angiosperm View MSA
122300506 5265 Fabidae View MSA
124068235 5270 Rosid View MSA
123744824 5271 Pentapetalae View MSA
122771260 5272 Eudicot View MSA
121351061 5274 Embryophyte View MSA
123427814 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.424        
cufflinks 4.331        
cufflinks 5.98       High
cufflinks 2.944        
cufflinks 4.057        
cufflinks 1.566       Low
cufflinks 3.406        
cufflinks 4.407        
cufflinks 2.139       Low

0 Strain