Gene : Medtr8g077115 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11247:SF25 - LIPID PHOSPHATE PHOSPHATASE EPSILON 1, CHLOROPLASTIC-RELATED Description:  phosphatidic acid phosphatase (PAP2) family protein
Genomic Order:  3984 Name:  ? Medtr8g077115
Secondary Identifier:  ? PAC:31076341
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula TRIGLSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g077115 0.5kb upstream 0.5kb upstream 7225   true chr8: 32750886-32758110 Medicago truncatula
Medtr8g077115 0.5kb upstream 0.5kb upstream 500   false chr8: 32750886-32751385 Medicago truncatula
Medtr8g077115 0.5kb downstream 0.5kb downstream 7225   true chr8: 32751386-32758610 Medicago truncatula
Medtr8g077115 0.5kb downstream 0.5kb downstream 500   false chr8: 32758111-32758610 Medicago truncatula
Medtr8g077115 1.0kb upstream 1.0kb upstream 7725   true chr8: 32750386-32758110 Medicago truncatula
Medtr8g077115 1.0kb upstream 1.0kb upstream 1000   false chr8: 32750386-32751385 Medicago truncatula
Medtr8g077115 1.0kb downstream 1.0kb downstream 7725   true chr8: 32751386-32759110 Medicago truncatula
Medtr8g077115 1.0kb downstream 1.0kb downstream 1000   false chr8: 32758111-32759110 Medicago truncatula
Medtr8g077115 2.0kb upstream 2.0kb upstream 8725   true chr8: 32749386-32758110 Medicago truncatula
Medtr8g077115 2.0kb upstream 2.0kb upstream 2000   false chr8: 32749386-32751385 Medicago truncatula
Medtr8g077115 2.0kb downstream 2.0kb downstream 8725   true chr8: 32751386-32760110 Medicago truncatula
Medtr8g077115 2.0kb downstream 2.0kb downstream 2000   false chr8: 32758111-32760110 Medicago truncatula
Medtr8g077115 5.0kb upstream 5.0kb upstream 11725   true chr8: 32746386-32758110 Medicago truncatula
Medtr8g077115 5.0kb upstream 5.0kb upstream 5000   false chr8: 32746386-32751385 Medicago truncatula
Medtr8g077115 5.0kb downstream 5.0kb downstream 11725   true chr8: 32751386-32763110 Medicago truncatula
Medtr8g077115 5.0kb downstream 5.0kb downstream 5000   false chr8: 32758111-32763110 Medicago truncatula
Medtr8g077115 10.0kb upstream 10.0kb upstream 16725   true chr8: 32741386-32758110 Medicago truncatula
Medtr8g077115 10.0kb upstream 10.0kb upstream 10000   false chr8: 32741386-32751385 Medicago truncatula
Medtr8g077115 10.0kb downstream 10.0kb downstream 16725   true chr8: 32751386-32768110 Medicago truncatula
Medtr8g077115 10.0kb downstream 10.0kb downstream 10000   false chr8: 32758111-32768110 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308854 5265 Fabidae View MSA
124066688 5270 Rosid View MSA
123737697 5271 Pentapetalae View MSA
122792032 5272 Eudicot View MSA
122049888 5273 Angiosperm View MSA
121311632 5274 Embryophyte View MSA
123426780 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.11       Low
cufflinks 1.298        
cufflinks 1.621       High
cufflinks 0.155        
cufflinks 2.197       High
cufflinks 0.171        
cufflinks 0.167        
cufflinks 1.591       High
cufflinks 0.134        

0 Strain