Gene : Medtr8g076920 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23070//PTHR23070:SF24 - BCS1 AAA-TYPE ATPASE Description:  P-loop nucleoside triphosphate hydrolase superfamily protein
Genomic Order:  3970 Name:  ? Medtr8g076920
Secondary Identifier:  ? PAC:31071139
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g076920 0.5kb upstream 0.5kb upstream 3567   true chr8: 32638942-32642508 Medicago truncatula
Medtr8g076920 0.5kb upstream 0.5kb upstream 500   false chr8: 32642009-32642508 Medicago truncatula
Medtr8g076920 0.5kb downstream 0.5kb downstream 3567   true chr8: 32638442-32642008 Medicago truncatula
Medtr8g076920 0.5kb downstream 0.5kb downstream 500   false chr8: 32638442-32638941 Medicago truncatula
Medtr8g076920 1.0kb upstream 1.0kb upstream 4067   true chr8: 32638942-32643008 Medicago truncatula
Medtr8g076920 1.0kb upstream 1.0kb upstream 1000   false chr8: 32642009-32643008 Medicago truncatula
Medtr8g076920 1.0kb downstream 1.0kb downstream 4067   true chr8: 32637942-32642008 Medicago truncatula
Medtr8g076920 1.0kb downstream 1.0kb downstream 1000   false chr8: 32637942-32638941 Medicago truncatula
Medtr8g076920 2.0kb upstream 2.0kb upstream 5067   true chr8: 32638942-32644008 Medicago truncatula
Medtr8g076920 2.0kb upstream 2.0kb upstream 2000   false chr8: 32642009-32644008 Medicago truncatula
Medtr8g076920 2.0kb downstream 2.0kb downstream 5067   true chr8: 32636942-32642008 Medicago truncatula
Medtr8g076920 2.0kb downstream 2.0kb downstream 2000   false chr8: 32636942-32638941 Medicago truncatula
Medtr8g076920 5.0kb upstream 5.0kb upstream 8067   true chr8: 32638942-32647008 Medicago truncatula
Medtr8g076920 5.0kb upstream 5.0kb upstream 5000   false chr8: 32642009-32647008 Medicago truncatula
Medtr8g076920 5.0kb downstream 5.0kb downstream 8067   true chr8: 32633942-32642008 Medicago truncatula
Medtr8g076920 5.0kb downstream 5.0kb downstream 5000   false chr8: 32633942-32638941 Medicago truncatula
Medtr8g076920 10.0kb upstream 10.0kb upstream 13067   true chr8: 32638942-32652008 Medicago truncatula
Medtr8g076920 10.0kb upstream 10.0kb upstream 10000   false chr8: 32642009-32652008 Medicago truncatula
Medtr8g076920 10.0kb downstream 10.0kb downstream 13067   true chr8: 32628942-32642008 Medicago truncatula
Medtr8g076920 10.0kb downstream 10.0kb downstream 10000   false chr8: 32628942-32638941 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299311 5265 Fabidae View MSA
124072397 5270 Rosid View MSA
123747421 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.53       High
cufflinks 0.145        
cufflinks 0.14        
cufflinks 0.094       Low
cufflinks 0.428        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.285        
cufflinks 0.233        
cufflinks 0.417        

0 Strain