Gene : Medtr8g076620 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Description:  zinc finger, LRP1 type protein
Genomic Order:  3947 Name:  ? Medtr8g076620
Secondary Identifier:  ? PAC:31075650
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g076620 0.5kb upstream 0.5kb upstream 3221   true chr8: 32481656-32484876 Medicago truncatula
Medtr8g076620 0.5kb upstream 0.5kb upstream 500   false chr8: 32481656-32482155 Medicago truncatula
Medtr8g076620 0.5kb downstream 0.5kb downstream 3221   true chr8: 32482156-32485376 Medicago truncatula
Medtr8g076620 0.5kb downstream 0.5kb downstream 500   false chr8: 32484877-32485376 Medicago truncatula
Medtr8g076620 1.0kb upstream 1.0kb upstream 3721   true chr8: 32481156-32484876 Medicago truncatula
Medtr8g076620 1.0kb upstream 1.0kb upstream 1000   false chr8: 32481156-32482155 Medicago truncatula
Medtr8g076620 1.0kb downstream 1.0kb downstream 3721   true chr8: 32482156-32485876 Medicago truncatula
Medtr8g076620 1.0kb downstream 1.0kb downstream 1000   false chr8: 32484877-32485876 Medicago truncatula
Medtr8g076620 2.0kb upstream 2.0kb upstream 4721   true chr8: 32480156-32484876 Medicago truncatula
Medtr8g076620 2.0kb upstream 2.0kb upstream 2000   false chr8: 32480156-32482155 Medicago truncatula
Medtr8g076620 2.0kb downstream 2.0kb downstream 4721   true chr8: 32482156-32486876 Medicago truncatula
Medtr8g076620 2.0kb downstream 2.0kb downstream 2000   false chr8: 32484877-32486876 Medicago truncatula
Medtr8g076620 5.0kb upstream 5.0kb upstream 7721   true chr8: 32477156-32484876 Medicago truncatula
Medtr8g076620 5.0kb upstream 5.0kb upstream 5000   false chr8: 32477156-32482155 Medicago truncatula
Medtr8g076620 5.0kb downstream 5.0kb downstream 7721   true chr8: 32482156-32489876 Medicago truncatula
Medtr8g076620 5.0kb downstream 5.0kb downstream 5000   false chr8: 32484877-32489876 Medicago truncatula
Medtr8g076620 10.0kb upstream 10.0kb upstream 12721   true chr8: 32472156-32484876 Medicago truncatula
Medtr8g076620 10.0kb upstream 10.0kb upstream 10000   false chr8: 32472156-32482155 Medicago truncatula
Medtr8g076620 10.0kb downstream 10.0kb downstream 12721   true chr8: 32482156-32494876 Medicago truncatula
Medtr8g076620 10.0kb downstream 10.0kb downstream 10000   false chr8: 32484877-32494876 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311985 5265 Fabidae View MSA
124067577 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.346       High
cufflinks 0.125        
cufflinks 0.146        
cufflinks 0.026     Low Low
cufflinks 0.175        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.054     Low  
cufflinks 0.119        
cufflinks 0.076     Low  

0 Strain