Gene : Medtr8g077950 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22952:SF123 - G-BOX-BINDING FACTOR 1 Description:  bZIP transcription factor family protein
Genomic Order:  4046 Name:  ? Medtr8g077950
Secondary Identifier:  ? PAC:31070057
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g077950 0.5kb upstream 0.5kb upstream 6311   true chr8: 33205912-33212222 Medicago truncatula
Medtr8g077950 0.5kb upstream 0.5kb upstream 500   false chr8: 33211723-33212222 Medicago truncatula
Medtr8g077950 0.5kb downstream 0.5kb downstream 6311   true chr8: 33205412-33211722 Medicago truncatula
Medtr8g077950 0.5kb downstream 0.5kb downstream 500   false chr8: 33205412-33205911 Medicago truncatula
Medtr8g077950 1.0kb upstream 1.0kb upstream 6811   true chr8: 33205912-33212722 Medicago truncatula
Medtr8g077950 1.0kb upstream 1.0kb upstream 1000   false chr8: 33211723-33212722 Medicago truncatula
Medtr8g077950 1.0kb downstream 1.0kb downstream 6811   true chr8: 33204912-33211722 Medicago truncatula
Medtr8g077950 1.0kb downstream 1.0kb downstream 1000   false chr8: 33204912-33205911 Medicago truncatula
Medtr8g077950 2.0kb upstream 2.0kb upstream 7811   true chr8: 33205912-33213722 Medicago truncatula
Medtr8g077950 2.0kb upstream 2.0kb upstream 2000   false chr8: 33211723-33213722 Medicago truncatula
Medtr8g077950 2.0kb downstream 2.0kb downstream 7811   true chr8: 33203912-33211722 Medicago truncatula
Medtr8g077950 2.0kb downstream 2.0kb downstream 2000   false chr8: 33203912-33205911 Medicago truncatula
Medtr8g077950 5.0kb upstream 5.0kb upstream 10811   true chr8: 33205912-33216722 Medicago truncatula
Medtr8g077950 5.0kb upstream 5.0kb upstream 5000   false chr8: 33211723-33216722 Medicago truncatula
Medtr8g077950 5.0kb downstream 5.0kb downstream 10811   true chr8: 33200912-33211722 Medicago truncatula
Medtr8g077950 5.0kb downstream 5.0kb downstream 5000   false chr8: 33200912-33205911 Medicago truncatula
Medtr8g077950 10.0kb upstream 10.0kb upstream 15811   true chr8: 33205912-33221722 Medicago truncatula
Medtr8g077950 10.0kb upstream 10.0kb upstream 10000   false chr8: 33211723-33221722 Medicago truncatula
Medtr8g077950 10.0kb downstream 10.0kb downstream 15811   true chr8: 33195912-33211722 Medicago truncatula
Medtr8g077950 10.0kb downstream 10.0kb downstream 10000   false chr8: 33195912-33205911 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299062 5265 Fabidae View MSA
124072155 5270 Rosid View MSA
123740041 5271 Pentapetalae View MSA
122791402 5272 Eudicot View MSA
122048438 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121351466 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.821        
cufflinks 8.965        
cufflinks 10.783     High High
cufflinks 1.63       Low
cufflinks 6.081        
cufflinks 1.303       Low
cufflinks 2.469        
cufflinks 12.041     High High
cufflinks 1.941        

0 Strain