Gene : Medtr8g077940 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31636:SF53 - SCARECROW-LIKE PROTEIN 15 Description:  GRAS family transcription factor
Genomic Order:  4045 Name:  ? Medtr8g077940
Secondary Identifier:  ? PAC:31070571
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g077940 0.5kb upstream 0.5kb upstream 2828   true chr8: 33202269-33205096 Medicago truncatula
Medtr8g077940 0.5kb upstream 0.5kb upstream 500   false chr8: 33202269-33202768 Medicago truncatula
Medtr8g077940 0.5kb downstream 0.5kb downstream 2828   true chr8: 33202769-33205596 Medicago truncatula
Medtr8g077940 0.5kb downstream 0.5kb downstream 500   false chr8: 33205097-33205596 Medicago truncatula
Medtr8g077940 1.0kb upstream 1.0kb upstream 3328   true chr8: 33201769-33205096 Medicago truncatula
Medtr8g077940 1.0kb upstream 1.0kb upstream 1000   false chr8: 33201769-33202768 Medicago truncatula
Medtr8g077940 1.0kb downstream 1.0kb downstream 3328   true chr8: 33202769-33206096 Medicago truncatula
Medtr8g077940 1.0kb downstream 1.0kb downstream 1000   false chr8: 33205097-33206096 Medicago truncatula
Medtr8g077940 2.0kb upstream 2.0kb upstream 4328   true chr8: 33200769-33205096 Medicago truncatula
Medtr8g077940 2.0kb upstream 2.0kb upstream 2000   false chr8: 33200769-33202768 Medicago truncatula
Medtr8g077940 2.0kb downstream 2.0kb downstream 4328   true chr8: 33202769-33207096 Medicago truncatula
Medtr8g077940 2.0kb downstream 2.0kb downstream 2000   false chr8: 33205097-33207096 Medicago truncatula
Medtr8g077940 5.0kb upstream 5.0kb upstream 7328   true chr8: 33197769-33205096 Medicago truncatula
Medtr8g077940 5.0kb upstream 5.0kb upstream 5000   false chr8: 33197769-33202768 Medicago truncatula
Medtr8g077940 5.0kb downstream 5.0kb downstream 7328   true chr8: 33202769-33210096 Medicago truncatula
Medtr8g077940 5.0kb downstream 5.0kb downstream 5000   false chr8: 33205097-33210096 Medicago truncatula
Medtr8g077940 10.0kb upstream 10.0kb upstream 12328   true chr8: 33192769-33205096 Medicago truncatula
Medtr8g077940 10.0kb upstream 10.0kb upstream 10000   false chr8: 33192769-33202768 Medicago truncatula
Medtr8g077940 10.0kb downstream 10.0kb downstream 12328   true chr8: 33202769-33215096 Medicago truncatula
Medtr8g077940 10.0kb downstream 10.0kb downstream 10000   false chr8: 33205097-33215096 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310795 5265 Fabidae View MSA
124061987 5270 Rosid View MSA
123738804 5271 Pentapetalae View MSA
122792539 5272 Eudicot View MSA
122048418 5273 Angiosperm View MSA
121350524 5274 Embryophyte View MSA
123381771 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.074     High  
cufflinks 22.719     High  
cufflinks 24.973     High  
cufflinks 31.038     High  
cufflinks 27.766     High  
cufflinks 23.653     High  
cufflinks 34.053     High High
cufflinks 19.833     High Low
cufflinks 31.34     High  

0 Strain