Gene : Medtr8g078730 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  4086
Name:  ? Medtr8g078730 Secondary Identifier:  ? PAC:31071913
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g078730 0.5kb upstream 0.5kb upstream 1847   true chr8: 33511821-33513667 Medicago truncatula
Medtr8g078730 0.5kb upstream 0.5kb upstream 500   false chr8: 33511821-33512320 Medicago truncatula
Medtr8g078730 0.5kb downstream 0.5kb downstream 1847   true chr8: 33512321-33514167 Medicago truncatula
Medtr8g078730 0.5kb downstream 0.5kb downstream 500   false chr8: 33513668-33514167 Medicago truncatula
Medtr8g078730 1.0kb upstream 1.0kb upstream 2347   true chr8: 33511321-33513667 Medicago truncatula
Medtr8g078730 1.0kb upstream 1.0kb upstream 1000   false chr8: 33511321-33512320 Medicago truncatula
Medtr8g078730 1.0kb downstream 1.0kb downstream 2347   true chr8: 33512321-33514667 Medicago truncatula
Medtr8g078730 1.0kb downstream 1.0kb downstream 1000   false chr8: 33513668-33514667 Medicago truncatula
Medtr8g078730 2.0kb upstream 2.0kb upstream 3347   true chr8: 33510321-33513667 Medicago truncatula
Medtr8g078730 2.0kb upstream 2.0kb upstream 2000   false chr8: 33510321-33512320 Medicago truncatula
Medtr8g078730 2.0kb downstream 2.0kb downstream 3347   true chr8: 33512321-33515667 Medicago truncatula
Medtr8g078730 2.0kb downstream 2.0kb downstream 2000   false chr8: 33513668-33515667 Medicago truncatula
Medtr8g078730 5.0kb upstream 5.0kb upstream 6347   true chr8: 33507321-33513667 Medicago truncatula
Medtr8g078730 5.0kb upstream 5.0kb upstream 5000   false chr8: 33507321-33512320 Medicago truncatula
Medtr8g078730 5.0kb downstream 5.0kb downstream 6347   true chr8: 33512321-33518667 Medicago truncatula
Medtr8g078730 5.0kb downstream 5.0kb downstream 5000   false chr8: 33513668-33518667 Medicago truncatula
Medtr8g078730 10.0kb upstream 10.0kb upstream 11347   true chr8: 33502321-33513667 Medicago truncatula
Medtr8g078730 10.0kb upstream 10.0kb upstream 10000   false chr8: 33502321-33512320 Medicago truncatula
Medtr8g078730 10.0kb downstream 10.0kb downstream 11347   true chr8: 33512321-33523667 Medicago truncatula
Medtr8g078730 10.0kb downstream 10.0kb downstream 10000   false chr8: 33513668-33523667 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122268917 5265 Fabidae Singleton cluster - no MSA
124062107 5270 Rosid View MSA
123738657 5271 Pentapetalae View MSA
122791149 5272 Eudicot View MSA
122041844 5273 Angiosperm View MSA
121344309 5274 Embryophyte View MSA
123380020 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.386        
cufflinks 0.098        
cufflinks 0.033     Low Low
cufflinks 0.488        
cufflinks 0.2        
cufflinks 0.045     Low Low
cufflinks 0.866       High
cufflinks 0.044     Low Low
cufflinks 0.806       High

0 Strain