Gene : Medtr8g069460 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11721 - 60S RIBOSOMAL PROTEIN L27A Description:  60S ribosomal protein L27a-3
Genomic Order:  3489 Name:  ? Medtr8g069460
Secondary Identifier:  ? PAC:31076582
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g069460 0.5kb upstream 0.5kb upstream 1319   true chr8: 29100916-29102234 Medicago truncatula
Medtr8g069460 0.5kb upstream 0.5kb upstream 500   false chr8: 29100916-29101415 Medicago truncatula
Medtr8g069460 0.5kb downstream 0.5kb downstream 1319   true chr8: 29101416-29102734 Medicago truncatula
Medtr8g069460 0.5kb downstream 0.5kb downstream 500   false chr8: 29102235-29102734 Medicago truncatula
Medtr8g069460 1.0kb upstream 1.0kb upstream 1819   true chr8: 29100416-29102234 Medicago truncatula
Medtr8g069460 1.0kb upstream 1.0kb upstream 1000   false chr8: 29100416-29101415 Medicago truncatula
Medtr8g069460 1.0kb downstream 1.0kb downstream 1819   true chr8: 29101416-29103234 Medicago truncatula
Medtr8g069460 1.0kb downstream 1.0kb downstream 1000   false chr8: 29102235-29103234 Medicago truncatula
Medtr8g069460 2.0kb upstream 2.0kb upstream 2819   true chr8: 29099416-29102234 Medicago truncatula
Medtr8g069460 2.0kb upstream 2.0kb upstream 2000   false chr8: 29099416-29101415 Medicago truncatula
Medtr8g069460 2.0kb downstream 2.0kb downstream 2819   true chr8: 29101416-29104234 Medicago truncatula
Medtr8g069460 2.0kb downstream 2.0kb downstream 2000   false chr8: 29102235-29104234 Medicago truncatula
Medtr8g069460 5.0kb upstream 5.0kb upstream 5819   true chr8: 29096416-29102234 Medicago truncatula
Medtr8g069460 5.0kb upstream 5.0kb upstream 5000   false chr8: 29096416-29101415 Medicago truncatula
Medtr8g069460 5.0kb downstream 5.0kb downstream 5819   true chr8: 29101416-29107234 Medicago truncatula
Medtr8g069460 5.0kb downstream 5.0kb downstream 5000   false chr8: 29102235-29107234 Medicago truncatula
Medtr8g069460 10.0kb upstream 10.0kb upstream 10819   true chr8: 29091416-29102234 Medicago truncatula
Medtr8g069460 10.0kb upstream 10.0kb upstream 10000   false chr8: 29091416-29101415 Medicago truncatula
Medtr8g069460 10.0kb downstream 10.0kb downstream 10819   true chr8: 29101416-29112234 Medicago truncatula
Medtr8g069460 10.0kb downstream 10.0kb downstream 10000   false chr8: 29102235-29112234 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296238 5265 Fabidae View MSA
124061356 5270 Rosid View MSA
123746209 5271 Pentapetalae View MSA
122794134 5272 Eudicot View MSA
122049114 5273 Angiosperm View MSA
121346652 5274 Embryophyte View MSA
123426087 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.134        
cufflinks 3.605       Low
cufflinks 4.033        
cufflinks 20.216     High High
cufflinks 10.195        
cufflinks 22.083     High High
cufflinks 6.085        
cufflinks 4.353        
cufflinks 13.884     High  

0 Strain