Gene : Medtr8g068830 M. truncatula Mt4.0v1
Defline:  (1 of 2) 3.5.1.19 - Nicotinamidase / Nicotine deamidase Description:  isochorismatase hydrolase family protein
Genomic Order:  3445 Name:  ? Medtr8g068830
Secondary Identifier:  ? PAC:31072147
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5381 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g068830 0.5kb upstream 0.5kb upstream 4292   true chr8: 28746131-28750422 Medicago truncatula
Medtr8g068830 0.5kb upstream 0.5kb upstream 500   false chr8: 28746131-28746630 Medicago truncatula
Medtr8g068830 0.5kb downstream 0.5kb downstream 4292   true chr8: 28746631-28750922 Medicago truncatula
Medtr8g068830 0.5kb downstream 0.5kb downstream 500   false chr8: 28750423-28750922 Medicago truncatula
Medtr8g068830 1.0kb upstream 1.0kb upstream 4792   true chr8: 28745631-28750422 Medicago truncatula
Medtr8g068830 1.0kb upstream 1.0kb upstream 1000   false chr8: 28745631-28746630 Medicago truncatula
Medtr8g068830 1.0kb downstream 1.0kb downstream 4792   true chr8: 28746631-28751422 Medicago truncatula
Medtr8g068830 1.0kb downstream 1.0kb downstream 1000   false chr8: 28750423-28751422 Medicago truncatula
Medtr8g068830 2.0kb upstream 2.0kb upstream 5792   true chr8: 28744631-28750422 Medicago truncatula
Medtr8g068830 2.0kb upstream 2.0kb upstream 2000   false chr8: 28744631-28746630 Medicago truncatula
Medtr8g068830 2.0kb downstream 2.0kb downstream 5792   true chr8: 28746631-28752422 Medicago truncatula
Medtr8g068830 2.0kb downstream 2.0kb downstream 2000   false chr8: 28750423-28752422 Medicago truncatula
Medtr8g068830 5.0kb upstream 5.0kb upstream 8792   true chr8: 28741631-28750422 Medicago truncatula
Medtr8g068830 5.0kb upstream 5.0kb upstream 5000   false chr8: 28741631-28746630 Medicago truncatula
Medtr8g068830 5.0kb downstream 5.0kb downstream 8792   true chr8: 28746631-28755422 Medicago truncatula
Medtr8g068830 5.0kb downstream 5.0kb downstream 5000   false chr8: 28750423-28755422 Medicago truncatula
Medtr8g068830 10.0kb upstream 10.0kb upstream 13792   true chr8: 28736631-28750422 Medicago truncatula
Medtr8g068830 10.0kb upstream 10.0kb upstream 10000   false chr8: 28736631-28746630 Medicago truncatula
Medtr8g068830 10.0kb downstream 10.0kb downstream 13792   true chr8: 28746631-28760422 Medicago truncatula
Medtr8g068830 10.0kb downstream 10.0kb downstream 10000   false chr8: 28750423-28760422 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311490 5265 Fabidae View MSA
124070936 5270 Rosid View MSA
123750859 5271 Pentapetalae View MSA
122789045 5272 Eudicot View MSA
122045390 5273 Angiosperm View MSA
121345440 5274 Embryophyte View MSA
123380217 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.031       Low
cufflinks 5.502        
cufflinks 6.492       High
cufflinks 4.23       Low
cufflinks 5.126        
cufflinks 4.901        
cufflinks 5.939       High
cufflinks 4.631        
cufflinks 4.864        

0 Strain