Gene : Medtr8g070510 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF00036//PF13499 - EF hand (EF-hand_1) // EF-hand domain pair (EF-hand_7) Description:  EF hand calcium-binding family protein
Genomic Order:  3598 Name:  ? Medtr8g070510
Secondary Identifier:  ? PAC:31073578
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g070510 0.5kb upstream 0.5kb upstream 4746   true chr8: 29971263-29976008 Medicago truncatula
Medtr8g070510 0.5kb upstream 0.5kb upstream 500   false chr8: 29971263-29971762 Medicago truncatula
Medtr8g070510 0.5kb downstream 0.5kb downstream 4746   true chr8: 29971763-29976508 Medicago truncatula
Medtr8g070510 0.5kb downstream 0.5kb downstream 500   false chr8: 29976009-29976508 Medicago truncatula
Medtr8g070510 1.0kb upstream 1.0kb upstream 5246   true chr8: 29970763-29976008 Medicago truncatula
Medtr8g070510 1.0kb upstream 1.0kb upstream 1000   false chr8: 29970763-29971762 Medicago truncatula
Medtr8g070510 1.0kb downstream 1.0kb downstream 5246   true chr8: 29971763-29977008 Medicago truncatula
Medtr8g070510 1.0kb downstream 1.0kb downstream 1000   false chr8: 29976009-29977008 Medicago truncatula
Medtr8g070510 2.0kb upstream 2.0kb upstream 6246   true chr8: 29969763-29976008 Medicago truncatula
Medtr8g070510 2.0kb upstream 2.0kb upstream 2000   false chr8: 29969763-29971762 Medicago truncatula
Medtr8g070510 2.0kb downstream 2.0kb downstream 6246   true chr8: 29971763-29978008 Medicago truncatula
Medtr8g070510 2.0kb downstream 2.0kb downstream 2000   false chr8: 29976009-29978008 Medicago truncatula
Medtr8g070510 5.0kb upstream 5.0kb upstream 9246   true chr8: 29966763-29976008 Medicago truncatula
Medtr8g070510 5.0kb upstream 5.0kb upstream 5000   false chr8: 29966763-29971762 Medicago truncatula
Medtr8g070510 5.0kb downstream 5.0kb downstream 9246   true chr8: 29971763-29981008 Medicago truncatula
Medtr8g070510 5.0kb downstream 5.0kb downstream 5000   false chr8: 29976009-29981008 Medicago truncatula
Medtr8g070510 10.0kb upstream 10.0kb upstream 14246   true chr8: 29961763-29976008 Medicago truncatula
Medtr8g070510 10.0kb upstream 10.0kb upstream 10000   false chr8: 29961763-29971762 Medicago truncatula
Medtr8g070510 10.0kb downstream 10.0kb downstream 14246   true chr8: 29971763-29986008 Medicago truncatula
Medtr8g070510 10.0kb downstream 10.0kb downstream 10000   false chr8: 29976009-29986008 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041090 5273 Angiosperm View MSA
122300657 5265 Fabidae View MSA
124060611 5270 Rosid View MSA
123746519 5271 Pentapetalae View MSA
122793448 5272 Eudicot View MSA
121346825 5274 Embryophyte View MSA
123425898 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.96        
cufflinks 1.394        
cufflinks 1.601        
cufflinks 0.496       Low
cufflinks 1.734       High
cufflinks 0.337       Low
cufflinks 0.997        
cufflinks 1.239        
cufflinks 1.146        

0 Strain