Gene : Medtr8g070480 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF07082 - Protein of unknown function (DUF1350) (DUF1350) Description:  plant/MCA23-20 protein
Genomic Order:  3600 Name:  ? Medtr8g070480
Secondary Identifier:  ? PAC:31075022
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g070480 0.5kb upstream 0.5kb upstream 5152   true chr8: 29992708-29997859 Medicago truncatula
Medtr8g070480 0.5kb upstream 0.5kb upstream 500   false chr8: 29997360-29997859 Medicago truncatula
Medtr8g070480 0.5kb downstream 0.5kb downstream 5152   true chr8: 29992208-29997359 Medicago truncatula
Medtr8g070480 0.5kb downstream 0.5kb downstream 500   false chr8: 29992208-29992707 Medicago truncatula
Medtr8g070480 1.0kb upstream 1.0kb upstream 5652   true chr8: 29992708-29998359 Medicago truncatula
Medtr8g070480 1.0kb upstream 1.0kb upstream 1000   false chr8: 29997360-29998359 Medicago truncatula
Medtr8g070480 1.0kb downstream 1.0kb downstream 5652   true chr8: 29991708-29997359 Medicago truncatula
Medtr8g070480 1.0kb downstream 1.0kb downstream 1000   false chr8: 29991708-29992707 Medicago truncatula
Medtr8g070480 2.0kb upstream 2.0kb upstream 6652   true chr8: 29992708-29999359 Medicago truncatula
Medtr8g070480 2.0kb upstream 2.0kb upstream 2000   false chr8: 29997360-29999359 Medicago truncatula
Medtr8g070480 2.0kb downstream 2.0kb downstream 6652   true chr8: 29990708-29997359 Medicago truncatula
Medtr8g070480 2.0kb downstream 2.0kb downstream 2000   false chr8: 29990708-29992707 Medicago truncatula
Medtr8g070480 5.0kb upstream 5.0kb upstream 9652   true chr8: 29992708-30002359 Medicago truncatula
Medtr8g070480 5.0kb upstream 5.0kb upstream 5000   false chr8: 29997360-30002359 Medicago truncatula
Medtr8g070480 5.0kb downstream 5.0kb downstream 9652   true chr8: 29987708-29997359 Medicago truncatula
Medtr8g070480 5.0kb downstream 5.0kb downstream 5000   false chr8: 29987708-29992707 Medicago truncatula
Medtr8g070480 10.0kb upstream 10.0kb upstream 14652   true chr8: 29992708-30007359 Medicago truncatula
Medtr8g070480 10.0kb upstream 10.0kb upstream 10000   false chr8: 29997360-30007359 Medicago truncatula
Medtr8g070480 10.0kb downstream 10.0kb downstream 14652   true chr8: 29982708-29997359 Medicago truncatula
Medtr8g070480 10.0kb downstream 10.0kb downstream 10000   false chr8: 29982708-29992707 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300067 5265 Fabidae View MSA
124063161 5270 Rosid View MSA
123738140 5271 Pentapetalae View MSA
122789213 5272 Eudicot View MSA
122044071 5273 Angiosperm View MSA
121345881 5274 Embryophyte View MSA
123427638 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.93        
cufflinks 2.644        
cufflinks 5.352       High
cufflinks 1.494        
cufflinks 2.452        
cufflinks 1.24        
cufflinks 1.934        
cufflinks 2.786        
cufflinks 0.827       Low

0 Strain