Gene : Medtr8g070860 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF10349 - WW-domain ligand protein (WWbp) Description:  arabinogalactan protein
Genomic Order:  3605 Name:  ? Medtr8g070860
Secondary Identifier:  ? PAC:31073783
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g070860 0.5kb upstream 0.5kb upstream 3311   true chr8: 30021443-30024753 Medicago truncatula
Medtr8g070860 0.5kb upstream 0.5kb upstream 500   false chr8: 30021443-30021942 Medicago truncatula
Medtr8g070860 0.5kb downstream 0.5kb downstream 3311   true chr8: 30021943-30025253 Medicago truncatula
Medtr8g070860 0.5kb downstream 0.5kb downstream 500   false chr8: 30024754-30025253 Medicago truncatula
Medtr8g070860 1.0kb upstream 1.0kb upstream 3811   true chr8: 30020943-30024753 Medicago truncatula
Medtr8g070860 1.0kb upstream 1.0kb upstream 1000   false chr8: 30020943-30021942 Medicago truncatula
Medtr8g070860 1.0kb downstream 1.0kb downstream 3811   true chr8: 30021943-30025753 Medicago truncatula
Medtr8g070860 1.0kb downstream 1.0kb downstream 1000   false chr8: 30024754-30025753 Medicago truncatula
Medtr8g070860 2.0kb upstream 2.0kb upstream 4811   true chr8: 30019943-30024753 Medicago truncatula
Medtr8g070860 2.0kb upstream 2.0kb upstream 2000   false chr8: 30019943-30021942 Medicago truncatula
Medtr8g070860 2.0kb downstream 2.0kb downstream 4811   true chr8: 30021943-30026753 Medicago truncatula
Medtr8g070860 2.0kb downstream 2.0kb downstream 2000   false chr8: 30024754-30026753 Medicago truncatula
Medtr8g070860 5.0kb upstream 5.0kb upstream 7811   true chr8: 30016943-30024753 Medicago truncatula
Medtr8g070860 5.0kb upstream 5.0kb upstream 5000   false chr8: 30016943-30021942 Medicago truncatula
Medtr8g070860 5.0kb downstream 5.0kb downstream 7811   true chr8: 30021943-30029753 Medicago truncatula
Medtr8g070860 5.0kb downstream 5.0kb downstream 5000   false chr8: 30024754-30029753 Medicago truncatula
Medtr8g070860 10.0kb upstream 10.0kb upstream 12811   true chr8: 30011943-30024753 Medicago truncatula
Medtr8g070860 10.0kb upstream 10.0kb upstream 10000   false chr8: 30011943-30021942 Medicago truncatula
Medtr8g070860 10.0kb downstream 10.0kb downstream 12811   true chr8: 30021943-30034753 Medicago truncatula
Medtr8g070860 10.0kb downstream 10.0kb downstream 10000   false chr8: 30024754-30034753 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312412 5265 Fabidae View MSA
124065343 5270 Rosid View MSA
123736865 5271 Pentapetalae View MSA
122788615 5272 Eudicot View MSA
122045480 5273 Angiosperm View MSA
121350995 5274 Embryophyte View MSA
123424898 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.36     High High
cufflinks 5.757        
cufflinks 4.824       Low
cufflinks 5.99        
cufflinks 5.486        
cufflinks 6.739        
cufflinks 8.745        
cufflinks 4.839       Low
cufflinks 7.507        

0 Strain