Gene : Medtr8g071100 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR10629:SF34 - DNA (CYTOSINE-5)-METHYLTRANSFERASE CMT2 Description:  DNA (cytosine-5)-methyltransferase
Genomic Order:  3625 Name:  ? Medtr8g071100
Secondary Identifier:  ? PAC:31070368
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g071100 0.5kb upstream 0.5kb upstream 13651   true chr8: 30158075-30171725 Medicago truncatula
Medtr8g071100 0.5kb upstream 0.5kb upstream 500   false chr8: 30158075-30158574 Medicago truncatula
Medtr8g071100 0.5kb downstream 0.5kb downstream 13651   true chr8: 30158575-30172225 Medicago truncatula
Medtr8g071100 0.5kb downstream 0.5kb downstream 500   false chr8: 30171726-30172225 Medicago truncatula
Medtr8g071100 1.0kb upstream 1.0kb upstream 14151   true chr8: 30157575-30171725 Medicago truncatula
Medtr8g071100 1.0kb upstream 1.0kb upstream 1000   false chr8: 30157575-30158574 Medicago truncatula
Medtr8g071100 1.0kb downstream 1.0kb downstream 14151   true chr8: 30158575-30172725 Medicago truncatula
Medtr8g071100 1.0kb downstream 1.0kb downstream 1000   false chr8: 30171726-30172725 Medicago truncatula
Medtr8g071100 2.0kb upstream 2.0kb upstream 15151   true chr8: 30156575-30171725 Medicago truncatula
Medtr8g071100 2.0kb upstream 2.0kb upstream 2000   false chr8: 30156575-30158574 Medicago truncatula
Medtr8g071100 2.0kb downstream 2.0kb downstream 15151   true chr8: 30158575-30173725 Medicago truncatula
Medtr8g071100 2.0kb downstream 2.0kb downstream 2000   false chr8: 30171726-30173725 Medicago truncatula
Medtr8g071100 5.0kb upstream 5.0kb upstream 18151   true chr8: 30153575-30171725 Medicago truncatula
Medtr8g071100 5.0kb upstream 5.0kb upstream 5000   false chr8: 30153575-30158574 Medicago truncatula
Medtr8g071100 5.0kb downstream 5.0kb downstream 18151   true chr8: 30158575-30176725 Medicago truncatula
Medtr8g071100 5.0kb downstream 5.0kb downstream 5000   false chr8: 30171726-30176725 Medicago truncatula
Medtr8g071100 10.0kb upstream 10.0kb upstream 23151   true chr8: 30148575-30171725 Medicago truncatula
Medtr8g071100 10.0kb upstream 10.0kb upstream 10000   false chr8: 30148575-30158574 Medicago truncatula
Medtr8g071100 10.0kb downstream 10.0kb downstream 23151   true chr8: 30158575-30181725 Medicago truncatula
Medtr8g071100 10.0kb downstream 10.0kb downstream 10000   false chr8: 30171726-30181725 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307648 5265 Fabidae View MSA
124071027 5270 Rosid View MSA
123743070 5271 Pentapetalae View MSA
122794759 5272 Eudicot View MSA
122046536 5273 Angiosperm View MSA
121345495 5274 Embryophyte View MSA
123428443 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.398       Low
cufflinks 1.159        
cufflinks 1.037        
cufflinks 0.346       Low
cufflinks 1.492       High
cufflinks 0.29       Low
cufflinks 1.112        
cufflinks 1.158        
cufflinks 0.849        

0 Strain