Gene : Medtr8g071970 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  3656 Name:  ? Medtr8g071970
Secondary Identifier:  ? PAC:31070844
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g071970 0.5kb upstream 0.5kb upstream 5174   true chr8: 30369960-30375133 Medicago truncatula
Medtr8g071970 0.5kb upstream 0.5kb upstream 500   false chr8: 30369960-30370459 Medicago truncatula
Medtr8g071970 0.5kb downstream 0.5kb downstream 5174   true chr8: 30370460-30375633 Medicago truncatula
Medtr8g071970 0.5kb downstream 0.5kb downstream 500   false chr8: 30375134-30375633 Medicago truncatula
Medtr8g071970 1.0kb upstream 1.0kb upstream 5674   true chr8: 30369460-30375133 Medicago truncatula
Medtr8g071970 1.0kb upstream 1.0kb upstream 1000   false chr8: 30369460-30370459 Medicago truncatula
Medtr8g071970 1.0kb downstream 1.0kb downstream 5674   true chr8: 30370460-30376133 Medicago truncatula
Medtr8g071970 1.0kb downstream 1.0kb downstream 1000   false chr8: 30375134-30376133 Medicago truncatula
Medtr8g071970 2.0kb upstream 2.0kb upstream 6674   true chr8: 30368460-30375133 Medicago truncatula
Medtr8g071970 2.0kb upstream 2.0kb upstream 2000   false chr8: 30368460-30370459 Medicago truncatula
Medtr8g071970 2.0kb downstream 2.0kb downstream 6674   true chr8: 30370460-30377133 Medicago truncatula
Medtr8g071970 2.0kb downstream 2.0kb downstream 2000   false chr8: 30375134-30377133 Medicago truncatula
Medtr8g071970 5.0kb upstream 5.0kb upstream 9674   true chr8: 30365460-30375133 Medicago truncatula
Medtr8g071970 5.0kb upstream 5.0kb upstream 5000   false chr8: 30365460-30370459 Medicago truncatula
Medtr8g071970 5.0kb downstream 5.0kb downstream 9674   true chr8: 30370460-30380133 Medicago truncatula
Medtr8g071970 5.0kb downstream 5.0kb downstream 5000   false chr8: 30375134-30380133 Medicago truncatula
Medtr8g071970 10.0kb upstream 10.0kb upstream 14674   true chr8: 30360460-30375133 Medicago truncatula
Medtr8g071970 10.0kb upstream 10.0kb upstream 10000   false chr8: 30360460-30370459 Medicago truncatula
Medtr8g071970 10.0kb downstream 10.0kb downstream 14674   true chr8: 30370460-30385133 Medicago truncatula
Medtr8g071970 10.0kb downstream 10.0kb downstream 10000   false chr8: 30375134-30385133 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301425 5265 Fabidae View MSA
124072588 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.724        
cufflinks 0.873        
cufflinks 1.05        
cufflinks 0.056     Low Low
cufflinks 1.891       High
cufflinks 0.56        
cufflinks 0.244        
cufflinks 0.949        
cufflinks 0.24        

0 Strain