Gene : Medtr8g072680 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12709:SF1 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC8 Description:  DNA-directed RNA polymerase III protein
Genomic Order:  3697 Name:  ? Medtr8g072680
Secondary Identifier:  ? PAC:31075104
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g072680 0.5kb upstream 0.5kb upstream 5111   true chr8: 30735166-30740276 Medicago truncatula
Medtr8g072680 0.5kb upstream 0.5kb upstream 500   false chr8: 30735166-30735665 Medicago truncatula
Medtr8g072680 0.5kb downstream 0.5kb downstream 5111   true chr8: 30735666-30740776 Medicago truncatula
Medtr8g072680 0.5kb downstream 0.5kb downstream 500   false chr8: 30740277-30740776 Medicago truncatula
Medtr8g072680 1.0kb upstream 1.0kb upstream 5611   true chr8: 30734666-30740276 Medicago truncatula
Medtr8g072680 1.0kb upstream 1.0kb upstream 1000   false chr8: 30734666-30735665 Medicago truncatula
Medtr8g072680 1.0kb downstream 1.0kb downstream 5611   true chr8: 30735666-30741276 Medicago truncatula
Medtr8g072680 1.0kb downstream 1.0kb downstream 1000   false chr8: 30740277-30741276 Medicago truncatula
Medtr8g072680 2.0kb upstream 2.0kb upstream 6611   true chr8: 30733666-30740276 Medicago truncatula
Medtr8g072680 2.0kb upstream 2.0kb upstream 2000   false chr8: 30733666-30735665 Medicago truncatula
Medtr8g072680 2.0kb downstream 2.0kb downstream 6611   true chr8: 30735666-30742276 Medicago truncatula
Medtr8g072680 2.0kb downstream 2.0kb downstream 2000   false chr8: 30740277-30742276 Medicago truncatula
Medtr8g072680 5.0kb upstream 5.0kb upstream 9611   true chr8: 30730666-30740276 Medicago truncatula
Medtr8g072680 5.0kb upstream 5.0kb upstream 5000   false chr8: 30730666-30735665 Medicago truncatula
Medtr8g072680 5.0kb downstream 5.0kb downstream 9611   true chr8: 30735666-30745276 Medicago truncatula
Medtr8g072680 5.0kb downstream 5.0kb downstream 5000   false chr8: 30740277-30745276 Medicago truncatula
Medtr8g072680 10.0kb upstream 10.0kb upstream 14611   true chr8: 30725666-30740276 Medicago truncatula
Medtr8g072680 10.0kb upstream 10.0kb upstream 10000   false chr8: 30725666-30735665 Medicago truncatula
Medtr8g072680 10.0kb downstream 10.0kb downstream 14611   true chr8: 30735666-30750276 Medicago truncatula
Medtr8g072680 10.0kb downstream 10.0kb downstream 10000   false chr8: 30740277-30750276 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026323 5273 Angiosperm View MSA
122300977 5265 Fabidae View MSA
124064217 5270 Rosid View MSA
123737129 5271 Pentapetalae View MSA
122791861 5272 Eudicot View MSA
121347367 5274 Embryophyte View MSA
123423953 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.504        
cufflinks 0.535        
cufflinks 0.55        
cufflinks 0.264        
cufflinks 0.741       High
cufflinks 0.143       Low
cufflinks 0.68        
cufflinks 0.481        
cufflinks 0.414        

0 Strain