Gene : Medtr8g058563 M. truncatula Mt4.0v1
Defline:  (1 of 3) 2.7.6.2 - Thiamine diphosphokinase / Thiamine pyrophosphokinase Description:  thiaminepyrophosphokinase
Genomic Order:  2512 Name:  ? Medtr8g058563
Secondary Identifier:  ? PAC:31074130
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6908 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g058563 0.5kb upstream 0.5kb upstream 2033   true chr8: 20189907-20191939 Medicago truncatula
Medtr8g058563 0.5kb upstream 0.5kb upstream 500   false chr8: 20189907-20190406 Medicago truncatula
Medtr8g058563 0.5kb downstream 0.5kb downstream 2033   true chr8: 20190407-20192439 Medicago truncatula
Medtr8g058563 0.5kb downstream 0.5kb downstream 500   false chr8: 20191940-20192439 Medicago truncatula
Medtr8g058563 1.0kb upstream 1.0kb upstream 2533   true chr8: 20189407-20191939 Medicago truncatula
Medtr8g058563 1.0kb upstream 1.0kb upstream 1000   false chr8: 20189407-20190406 Medicago truncatula
Medtr8g058563 1.0kb downstream 1.0kb downstream 2533   true chr8: 20190407-20192939 Medicago truncatula
Medtr8g058563 1.0kb downstream 1.0kb downstream 1000   false chr8: 20191940-20192939 Medicago truncatula
Medtr8g058563 2.0kb upstream 2.0kb upstream 3533   true chr8: 20188407-20191939 Medicago truncatula
Medtr8g058563 2.0kb upstream 2.0kb upstream 2000   false chr8: 20188407-20190406 Medicago truncatula
Medtr8g058563 2.0kb downstream 2.0kb downstream 3533   true chr8: 20190407-20193939 Medicago truncatula
Medtr8g058563 2.0kb downstream 2.0kb downstream 2000   false chr8: 20191940-20193939 Medicago truncatula
Medtr8g058563 5.0kb upstream 5.0kb upstream 6533   true chr8: 20185407-20191939 Medicago truncatula
Medtr8g058563 5.0kb upstream 5.0kb upstream 5000   false chr8: 20185407-20190406 Medicago truncatula
Medtr8g058563 5.0kb downstream 5.0kb downstream 6533   true chr8: 20190407-20196939 Medicago truncatula
Medtr8g058563 5.0kb downstream 5.0kb downstream 5000   false chr8: 20191940-20196939 Medicago truncatula
Medtr8g058563 10.0kb upstream 10.0kb upstream 11533   true chr8: 20180407-20191939 Medicago truncatula
Medtr8g058563 10.0kb upstream 10.0kb upstream 10000   false chr8: 20180407-20190406 Medicago truncatula
Medtr8g058563 10.0kb downstream 10.0kb downstream 11533   true chr8: 20190407-20201939 Medicago truncatula
Medtr8g058563 10.0kb downstream 10.0kb downstream 10000   false chr8: 20191940-20201939 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691706 5273 Angiosperm View MSA
122316290 5265 Fabidae View MSA
124041464 5270 Rosid View MSA
123647701 5271 Pentapetalae View MSA
122681660 5272 Eudicot View MSA
120963548 5274 Embryophyte View MSA
123003890 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.037     Low  
cufflinks 0.017     Low  
cufflinks 0.01     Low Low
cufflinks 0.093       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain