Gene : Medtr8g058330 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR10906 - SECY/SEC61-ALPHA FAMILY MEMBER Description:  protein transporter Sec61 subunit alpha-like protein
Genomic Order:  2498 Name:  ? Medtr8g058330
Secondary Identifier:  ? PAC:31072263
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g058330 0.5kb upstream 0.5kb upstream 4248   true chr8: 20086594-20090841 Medicago truncatula
Medtr8g058330 0.5kb upstream 0.5kb upstream 500   false chr8: 20086594-20087093 Medicago truncatula
Medtr8g058330 0.5kb downstream 0.5kb downstream 4248   true chr8: 20087094-20091341 Medicago truncatula
Medtr8g058330 0.5kb downstream 0.5kb downstream 500   false chr8: 20090842-20091341 Medicago truncatula
Medtr8g058330 1.0kb upstream 1.0kb upstream 4748   true chr8: 20086094-20090841 Medicago truncatula
Medtr8g058330 1.0kb upstream 1.0kb upstream 1000   false chr8: 20086094-20087093 Medicago truncatula
Medtr8g058330 1.0kb downstream 1.0kb downstream 4748   true chr8: 20087094-20091841 Medicago truncatula
Medtr8g058330 1.0kb downstream 1.0kb downstream 1000   false chr8: 20090842-20091841 Medicago truncatula
Medtr8g058330 2.0kb upstream 2.0kb upstream 5748   true chr8: 20085094-20090841 Medicago truncatula
Medtr8g058330 2.0kb upstream 2.0kb upstream 2000   false chr8: 20085094-20087093 Medicago truncatula
Medtr8g058330 2.0kb downstream 2.0kb downstream 5748   true chr8: 20087094-20092841 Medicago truncatula
Medtr8g058330 2.0kb downstream 2.0kb downstream 2000   false chr8: 20090842-20092841 Medicago truncatula
Medtr8g058330 5.0kb upstream 5.0kb upstream 8748   true chr8: 20082094-20090841 Medicago truncatula
Medtr8g058330 5.0kb upstream 5.0kb upstream 5000   false chr8: 20082094-20087093 Medicago truncatula
Medtr8g058330 5.0kb downstream 5.0kb downstream 8748   true chr8: 20087094-20095841 Medicago truncatula
Medtr8g058330 5.0kb downstream 5.0kb downstream 5000   false chr8: 20090842-20095841 Medicago truncatula
Medtr8g058330 10.0kb upstream 10.0kb upstream 13748   true chr8: 20077094-20090841 Medicago truncatula
Medtr8g058330 10.0kb upstream 10.0kb upstream 10000   false chr8: 20077094-20087093 Medicago truncatula
Medtr8g058330 10.0kb downstream 10.0kb downstream 13748   true chr8: 20087094-20100841 Medicago truncatula
Medtr8g058330 10.0kb downstream 10.0kb downstream 10000   false chr8: 20090842-20100841 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303091 5265 Fabidae View MSA
124061120 5270 Rosid View MSA
123743159 5271 Pentapetalae View MSA
122792380 5272 Eudicot View MSA
122043956 5273 Angiosperm View MSA
121349680 5274 Embryophyte View MSA
123426638 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 126.999     High High
cufflinks 39.936     High  
cufflinks 36.723     High  
cufflinks 142.711     High High
cufflinks 38.008     High  
cufflinks 67.794     High  
cufflinks 90.099     High  
cufflinks 29.351     High Low
cufflinks 126.152     High High

0 Strain