Gene : Medtr8g056860 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23076:SF44 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC Description:  ATP-dependent zinc metalloprotease FTSH protein
Genomic Order:  2401 Name:  ? Medtr8g056860
Secondary Identifier:  ? PAC:31073668
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g056860 0.5kb upstream 0.5kb upstream 14562   true chr8: 18929554-18944115 Medicago truncatula
Medtr8g056860 0.5kb upstream 0.5kb upstream 500   false chr8: 18929554-18930053 Medicago truncatula
Medtr8g056860 0.5kb downstream 0.5kb downstream 14562   true chr8: 18930054-18944615 Medicago truncatula
Medtr8g056860 0.5kb downstream 0.5kb downstream 500   false chr8: 18944116-18944615 Medicago truncatula
Medtr8g056860 1.0kb upstream 1.0kb upstream 15062   true chr8: 18929054-18944115 Medicago truncatula
Medtr8g056860 1.0kb upstream 1.0kb upstream 1000   false chr8: 18929054-18930053 Medicago truncatula
Medtr8g056860 1.0kb downstream 1.0kb downstream 15062   true chr8: 18930054-18945115 Medicago truncatula
Medtr8g056860 1.0kb downstream 1.0kb downstream 1000   false chr8: 18944116-18945115 Medicago truncatula
Medtr8g056860 2.0kb upstream 2.0kb upstream 16062   true chr8: 18928054-18944115 Medicago truncatula
Medtr8g056860 2.0kb upstream 2.0kb upstream 2000   false chr8: 18928054-18930053 Medicago truncatula
Medtr8g056860 2.0kb downstream 2.0kb downstream 16062   true chr8: 18930054-18946115 Medicago truncatula
Medtr8g056860 2.0kb downstream 2.0kb downstream 2000   false chr8: 18944116-18946115 Medicago truncatula
Medtr8g056860 5.0kb upstream 5.0kb upstream 19062   true chr8: 18925054-18944115 Medicago truncatula
Medtr8g056860 5.0kb upstream 5.0kb upstream 5000   false chr8: 18925054-18930053 Medicago truncatula
Medtr8g056860 5.0kb downstream 5.0kb downstream 19062   true chr8: 18930054-18949115 Medicago truncatula
Medtr8g056860 5.0kb downstream 5.0kb downstream 5000   false chr8: 18944116-18949115 Medicago truncatula
Medtr8g056860 10.0kb upstream 10.0kb upstream 24062   true chr8: 18920054-18944115 Medicago truncatula
Medtr8g056860 10.0kb upstream 10.0kb upstream 10000   false chr8: 18920054-18930053 Medicago truncatula
Medtr8g056860 10.0kb downstream 10.0kb downstream 24062   true chr8: 18930054-18954115 Medicago truncatula
Medtr8g056860 10.0kb downstream 10.0kb downstream 10000   false chr8: 18944116-18954115 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302138 5265 Fabidae View MSA
124065156 5270 Rosid View MSA
123736901 5271 Pentapetalae View MSA
122790141 5272 Eudicot View MSA
122047012 5273 Angiosperm View MSA
121345468 5274 Embryophyte View MSA
123380221 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.361        
cufflinks 1.433        
cufflinks 2.12        
cufflinks 0.045     Low Low
cufflinks 5.707       High
cufflinks 0.046     Low Low
cufflinks 0.418        
cufflinks 3.052        
cufflinks 0.318        

0 Strain