Gene : Medtr8g059125 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12385//PTHR12385:SF47 - CTL TRANSPORTER Description:  plasma-membrane choline transporter family protein
Genomic Order:  2545 Name:  ? Medtr8g059125
Secondary Identifier:  ? PAC:31076409
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g059125 0.5kb upstream 0.5kb upstream 7814   true chr8: 20671350-20679163 Medicago truncatula
Medtr8g059125 0.5kb upstream 0.5kb upstream 500   false chr8: 20671350-20671849 Medicago truncatula
Medtr8g059125 0.5kb downstream 0.5kb downstream 7814   true chr8: 20671850-20679663 Medicago truncatula
Medtr8g059125 0.5kb downstream 0.5kb downstream 500   false chr8: 20679164-20679663 Medicago truncatula
Medtr8g059125 1.0kb upstream 1.0kb upstream 8314   true chr8: 20670850-20679163 Medicago truncatula
Medtr8g059125 1.0kb upstream 1.0kb upstream 1000   false chr8: 20670850-20671849 Medicago truncatula
Medtr8g059125 1.0kb downstream 1.0kb downstream 8314   true chr8: 20671850-20680163 Medicago truncatula
Medtr8g059125 1.0kb downstream 1.0kb downstream 1000   false chr8: 20679164-20680163 Medicago truncatula
Medtr8g059125 2.0kb upstream 2.0kb upstream 9314   true chr8: 20669850-20679163 Medicago truncatula
Medtr8g059125 2.0kb upstream 2.0kb upstream 2000   false chr8: 20669850-20671849 Medicago truncatula
Medtr8g059125 2.0kb downstream 2.0kb downstream 9314   true chr8: 20671850-20681163 Medicago truncatula
Medtr8g059125 2.0kb downstream 2.0kb downstream 2000   false chr8: 20679164-20681163 Medicago truncatula
Medtr8g059125 5.0kb upstream 5.0kb upstream 12314   true chr8: 20666850-20679163 Medicago truncatula
Medtr8g059125 5.0kb upstream 5.0kb upstream 5000   false chr8: 20666850-20671849 Medicago truncatula
Medtr8g059125 5.0kb downstream 5.0kb downstream 12314   true chr8: 20671850-20684163 Medicago truncatula
Medtr8g059125 5.0kb downstream 5.0kb downstream 5000   false chr8: 20679164-20684163 Medicago truncatula
Medtr8g059125 10.0kb upstream 10.0kb upstream 17314   true chr8: 20661850-20679163 Medicago truncatula
Medtr8g059125 10.0kb upstream 10.0kb upstream 10000   false chr8: 20661850-20671849 Medicago truncatula
Medtr8g059125 10.0kb downstream 10.0kb downstream 17314   true chr8: 20671850-20689163 Medicago truncatula
Medtr8g059125 10.0kb downstream 10.0kb downstream 10000   false chr8: 20679164-20689163 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299366 5265 Fabidae View MSA
124068614 5270 Rosid View MSA
123746416 5271 Pentapetalae View MSA
122790584 5272 Eudicot View MSA
122045224 5273 Angiosperm View MSA
121347248 5274 Embryophyte View MSA
123428295 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.047       High
cufflinks 2.809        
cufflinks 2.581        
cufflinks 4.524        
cufflinks 3.773        
cufflinks 2.421        
cufflinks 5.024        
cufflinks 2.016       Low
cufflinks 5.448        

0 Strain