Gene : Medtr8g059115 M. truncatula Mt4.0v1
Defline:  (1 of 10) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Description:  PPR containing plant-like protein
Genomic Order:  2544 Name:  ? Medtr8g059115
Secondary Identifier:  ? PAC:31072106
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g059115 0.5kb upstream 0.5kb upstream 1994   true chr8: 20660678-20662671 Medicago truncatula
Medtr8g059115 0.5kb upstream 0.5kb upstream 500   false chr8: 20660678-20661177 Medicago truncatula
Medtr8g059115 0.5kb downstream 0.5kb downstream 1994   true chr8: 20661178-20663171 Medicago truncatula
Medtr8g059115 0.5kb downstream 0.5kb downstream 500   false chr8: 20662672-20663171 Medicago truncatula
Medtr8g059115 1.0kb upstream 1.0kb upstream 2494   true chr8: 20660178-20662671 Medicago truncatula
Medtr8g059115 1.0kb upstream 1.0kb upstream 1000   false chr8: 20660178-20661177 Medicago truncatula
Medtr8g059115 1.0kb downstream 1.0kb downstream 2494   true chr8: 20661178-20663671 Medicago truncatula
Medtr8g059115 1.0kb downstream 1.0kb downstream 1000   false chr8: 20662672-20663671 Medicago truncatula
Medtr8g059115 2.0kb upstream 2.0kb upstream 3494   true chr8: 20659178-20662671 Medicago truncatula
Medtr8g059115 2.0kb upstream 2.0kb upstream 2000   false chr8: 20659178-20661177 Medicago truncatula
Medtr8g059115 2.0kb downstream 2.0kb downstream 3494   true chr8: 20661178-20664671 Medicago truncatula
Medtr8g059115 2.0kb downstream 2.0kb downstream 2000   false chr8: 20662672-20664671 Medicago truncatula
Medtr8g059115 5.0kb upstream 5.0kb upstream 6494   true chr8: 20656178-20662671 Medicago truncatula
Medtr8g059115 5.0kb upstream 5.0kb upstream 5000   false chr8: 20656178-20661177 Medicago truncatula
Medtr8g059115 5.0kb downstream 5.0kb downstream 6494   true chr8: 20661178-20667671 Medicago truncatula
Medtr8g059115 5.0kb downstream 5.0kb downstream 5000   false chr8: 20662672-20667671 Medicago truncatula
Medtr8g059115 10.0kb upstream 10.0kb upstream 11494   true chr8: 20651178-20662671 Medicago truncatula
Medtr8g059115 10.0kb upstream 10.0kb upstream 10000   false chr8: 20651178-20661177 Medicago truncatula
Medtr8g059115 10.0kb downstream 10.0kb downstream 11494   true chr8: 20661178-20672671 Medicago truncatula
Medtr8g059115 10.0kb downstream 10.0kb downstream 10000   false chr8: 20662672-20672671 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310174 5265 Fabidae View MSA
124072029 5270 Rosid View MSA
123744765 5271 Pentapetalae View MSA
122790014 5272 Eudicot View MSA
122049142 5273 Angiosperm View MSA
121311265 5274 Embryophyte View MSA
123348580 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.454        
cufflinks 3.204        
cufflinks 3.237        
cufflinks 1.246        
cufflinks 5.195       High
cufflinks 1.696        
cufflinks 1.066       Low
cufflinks 2.474        
cufflinks 1.619        

0 Strain