Gene : Medtr8g061130 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33370:SF1 - TRANSLATION INITIATION FACTOR IF-1, CHLOROPLASTIC Description:  translation initiation factor IF-1
Genomic Order:  2587 Name:  ? Medtr8g061130
Secondary Identifier:  ? PAC:31072356
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g061130 0.5kb upstream 0.5kb upstream 1384   true chr8: 21189155-21190538 Medicago truncatula
Medtr8g061130 0.5kb upstream 0.5kb upstream 500   false chr8: 21190039-21190538 Medicago truncatula
Medtr8g061130 0.5kb downstream 0.5kb downstream 1384   true chr8: 21188655-21190038 Medicago truncatula
Medtr8g061130 0.5kb downstream 0.5kb downstream 500   false chr8: 21188655-21189154 Medicago truncatula
Medtr8g061130 1.0kb upstream 1.0kb upstream 1884   true chr8: 21189155-21191038 Medicago truncatula
Medtr8g061130 1.0kb upstream 1.0kb upstream 1000   false chr8: 21190039-21191038 Medicago truncatula
Medtr8g061130 1.0kb downstream 1.0kb downstream 1884   true chr8: 21188155-21190038 Medicago truncatula
Medtr8g061130 1.0kb downstream 1.0kb downstream 1000   false chr8: 21188155-21189154 Medicago truncatula
Medtr8g061130 2.0kb upstream 2.0kb upstream 2884   true chr8: 21189155-21192038 Medicago truncatula
Medtr8g061130 2.0kb upstream 2.0kb upstream 2000   false chr8: 21190039-21192038 Medicago truncatula
Medtr8g061130 2.0kb downstream 2.0kb downstream 2884   true chr8: 21187155-21190038 Medicago truncatula
Medtr8g061130 2.0kb downstream 2.0kb downstream 2000   false chr8: 21187155-21189154 Medicago truncatula
Medtr8g061130 5.0kb upstream 5.0kb upstream 5884   true chr8: 21189155-21195038 Medicago truncatula
Medtr8g061130 5.0kb upstream 5.0kb upstream 5000   false chr8: 21190039-21195038 Medicago truncatula
Medtr8g061130 5.0kb downstream 5.0kb downstream 5884   true chr8: 21184155-21190038 Medicago truncatula
Medtr8g061130 5.0kb downstream 5.0kb downstream 5000   false chr8: 21184155-21189154 Medicago truncatula
Medtr8g061130 10.0kb upstream 10.0kb upstream 10884   true chr8: 21189155-21200038 Medicago truncatula
Medtr8g061130 10.0kb upstream 10.0kb upstream 10000   false chr8: 21190039-21200038 Medicago truncatula
Medtr8g061130 10.0kb downstream 10.0kb downstream 10884   true chr8: 21179155-21190038 Medicago truncatula
Medtr8g061130 10.0kb downstream 10.0kb downstream 10000   false chr8: 21179155-21189154 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028984 5273 Angiosperm View MSA
122301110 5265 Fabidae View MSA
124050669 5270 Rosid View MSA
123744849 5271 Pentapetalae View MSA
122771270 5272 Eudicot View MSA
121351623 5274 Embryophyte View MSA
123428074 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.386       Low
cufflinks 38.0     High  
cufflinks 39.792     High  
cufflinks 14.384     High  
cufflinks 58.798     High High
cufflinks 8.937        
cufflinks 5.674       Low
cufflinks 41.318     High  
cufflinks 6.882        

0 Strain